Phylogenetic methods in biogeography

F Ronquist, I Sanmartín - Annual Review of Ecology, Evolution …, 2011 - annualreviews.org
Phylogenetic approaches to biogeography are rapidly becoming more sophisticated. Four
types of models are being explored in the literature:(a) diffusion models,(b) island models,(c) …

Spatio-temporal history of the endemic genera of Madagascar

S Buerki, DS Devey, MW Callmander… - Botanical Journal of …, 2013 - academic.oup.com
Madagascar is renowned for its unparalleled species richness and levels of endemism,
which have led, in combination with species extinction caused by an unprecedented rate of …

RASP (Reconstruct Ancestral State in Phylogenies): a tool for historical biogeography

Y Yu, AJ Harris, C Blair, X He - Molecular phylogenetics and evolution, 2015 - Elsevier
We announce the release of Reconstruct Ancestral State in Phylogenies (RASP), a user-
friendly software package for inferring historical biogeography through reconstructing …

Model selection in historical biogeography reveals that founder-event speciation is a crucial process in island clades

NJ Matzke - Systematic biology, 2014 - academic.oup.com
Founder-event speciation, where a rare jump dispersal event founds a new genetically
isolated lineage, has long been considered crucial by many historical biogeographers, but …

[图书][B] Probabilistic historical biogeography: new models for founder-event speciation, imperfect detection, and fossils allow improved accuracy and model-testing

NJ Matzke - 2013 - search.proquest.com
Historical biogeography has a diversity of methods for inferring ancestral geographic ranges
on phylogenies, but many of the methods have conflicting assumptions, and there is no …

Bayesian analysis of biogeography when the number of areas is large

MJ Landis, NJ Matzke, BR Moore… - Systematic …, 2013 - academic.oup.com
Historical biogeography is increasingly studied from an explicitly statistical perspective,
using stochastic models to describe the evolution of species range as a continuous-time …

Bayesian estimation of the global biogeographical history of the Solanaceae

J Dupin, NJ Matzke, T Särkinen, S Knapp… - Journal of …, 2017 - Wiley Online Library
Abstract Aim The tomato family Solanaceae is distributed on all major continents except
Antarctica and has its centre of diversity in South America. Its worldwide distribution …

Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis

RH Ree, SA Smith - Systematic biology, 2008 - academic.oup.com
In historical biogeography, model-based inference methods for reconstructing the evolution
of geographic ranges on phylogenetic trees are poorly developed relative to the diversity of …

[图书][B] Care of the species: Races of corn and the science of plant biodiversity

J Hartigan Jr - 2017 - books.google.com
Across the globe, an expanding circle of care is encompassing a growing number of species
through efforts targeting biodiversity, profoundly revising the line between humans and …

The historical biogeography of coral reef fishes: global patterns of origination and dispersal

PF Cowman, DR Bellwood - Journal of biogeography, 2013 - Wiley Online Library
Aim To use recently published phylogenies of three major reef fish families to explore global
patterns of species origin and dispersal over the past 65 million years. The key questions …