Transposable elements and the evolution of insects

C Gilbert, J Peccoud, R Cordaux - Annual Review of Entomology, 2021 - annualreviews.org
Insects are major contributors to our understanding of the interaction between transposable
elements (TEs) and their hosts, owing to seminal discoveries, as well as to the growing …

Population Genomics of Transposable Elements in Drosophila

MG Barrón, AS Fiston-Lavier, DA Petrov… - Annual review of …, 2014 - annualreviews.org
Studies of the population dynamics of transposable elements (TEs) in Drosophila
melanogaster indicate that consistent forces are affecting TEs independently of their modes …

[HTML][HTML] Genome-wide signatures of adaptation to extreme environments in red algae

CH Cho, SI Park, TY Huang, Y Lee, C Ciniglia… - Nature …, 2023 - nature.com
The high temperature, acidity, and heavy metal-rich environments associated with hot
springs have a major impact on biological processes in resident cells. One group of …

Long reads are revolutionizing 20 years of insect genome sequencing

S Hotaling, JS Sproul, J Heckenhauer… - Genome Biology and …, 2021 - academic.oup.com
The first insect genome assembly (Drosophila melanogaster) was published two decades
ago. Today, nuclear genome assemblies are available for a staggering 601 insect species …

PSMC analysis of effective population sizes in molecular ecology and its application to black‐and‐white Ficedula flycatchers

K Nadachowska‐Brzyska, R Burri, L Smeds… - Molecular …, 2016 - Wiley Online Library
Climatic fluctuations during the Quaternary period governed the demography of species and
contributed to population differentiation and ultimately speciation. Studies of these past …

[HTML][HTML] The genomes of two key bumblebee species with primitive eusocial organization

BM Sadd, SM Barribeau, G Bloch, DC De Graaf… - Genome biology, 2015 - Springer
Background The shift from solitary to social behavior is one of the major evolutionary
transitions. Primitively eusocial bumblebees are uniquely placed to illuminate the evolution …

[HTML][HTML] Epigenetic plasticity enables copepods to cope with ocean acidification

YH Lee, MS Kim, M Wang, RK Bhandari… - Nature Climate …, 2022 - nature.com
Plasticity enhances species fitness and survival under climate change. Ocean acidification
poses a potential threat to copepods, a major zooplankton group that serves as a key link …

[HTML][HTML] Diversity and evolution of the transposable element repertoire in arthropods with particular reference to insects

M Petersen, D Armisén, RA Gibbs, L Hering… - BMC Ecology and …, 2019 - Springer
Abstract Background Transposable elements (TEs) are a major component of metazoan
genomes and are associated with a variety of mechanisms that shape genome architecture …

Evolutionary history of chemosensory-related gene families across the Arthropoda

S Eyun, HY Soh, M Posavi, JB Munro… - Molecular biology …, 2017 - academic.oup.com
Chemosensory-related gene (CRG) families have been studied extensively in insects, but
their evolutionary history across the Arthropoda had remained relatively unexplored. Here …

MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach

BL Brown, M Watson, SS Minot, MC Rivera… - …, 2017 - academic.oup.com
Background Environmental metagenomic analysis is typically accomplished by assigning
taxonomy and/or function from whole genome sequencing or 16S amplicon sequences …