Identification of selection signatures in livestock species

JJS Gouveia, MVGB Silva, SR Paiva… - Genetics and molecular …, 2014 - SciELO Brasil
The identification of regions that have undergone selection is one of the principal goals of
theoretical and applied evolutionary genetics. Such studies can also provide information …

Native pig breeds as a source of biodiversity—Breeding and economic aspects

A Kasprzyk, A Walenia - Agriculture, 2023 - mdpi.com
The purpose of this paper is to summarize the available important information on local pig
breeds maintained in Europe. Genetic erosion has prompted national and international …

Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources …

S Bovo, A Ribani, M Muñoz, E Alves, JP Araujo… - Genetics Selection …, 2020 - Springer
Background Natural and artificial directional selection in cosmopolitan and autochthonous
pig breeds and wild boars have shaped their genomes and resulted in a reservoir of animal …

Uncovering genes underlying coat color variation in indigenous cattle breeds through genome-wide positive selection

D Rajawat, M Panigrahi, SS Nayak… - Animal …, 2023 - Taylor & Francis
The identification of candidate genes related to pigmentation and under selective sweep
provides insights into the genetic basis of pigmentation and the evolutionary forces that have …

Copy Number Variation and Missense Mutations of the Agouti Signaling Protein (ASIP) Gene in Goat Breeds with Different Coat Colors

L Fontanesi, F Beretti, V Riggio… - … and genome research, 2010 - karger.com
In goats, classical genetic studies reported a large number of alleles at the Agouti locus with
effects on coat color and pattern distribution. From these early studies, the dominant A Wt …

Diversity across major and candidate genes in European local pig breeds

M Muñoz, R Bozzi, F García, Y Núñez, C Geraci… - PloS one, 2018 - journals.plos.org
The aim of this work was to analyse the distribution of causal and candidate mutations
associated to relevant productive traits in twenty local European pig breeds. Also, the …

An initial comparative map of copy number variations in the goat (Capra hircus) genome

L Fontanesi, PL Martelli, F Beretti, V Riggio, S Dall'Olio… - BMC genomics, 2010 - Springer
Abstract Background The goat (Capra hircus) represents one of the most important farm
animal species. It is reared in all continents with an estimated world population of about 800 …

Genome-wide landscape of runs of homozygosity and differentiation across Egyptian goat breeds

AM Sallam, H Reyer, K Wimmers, F Bertolini… - BMC genomics, 2023 - Springer
Understanding the genomic features of livestock is essential for successful breeding
programs and conservation. This information is scarce for local goat breeds in Egypt. In the …

Accelerating Silphium Domestication: An Opportunity to Develop New Crop Ideotypes and Breeding Strategies Informed by Multiple Disciplines

DL Van Tassel, KA Albrecht, JD Bever, AA Boe… - Crop …, 2017 - Wiley Online Library
Silphium perfoliatum L.(cup plant, silphie) and S. integrifolium Michx.(rosinweed, silflower)
are in the same subfamily and tribe as sunflower (Helianthus annuus L.). Silphium …

[HTML][HTML] A first comparative map of copy number variations in the sheep genome

L Fontanesi, F Beretti, PL Martelli, M Colombo… - Genomics, 2011 - Elsevier
We carried out a cross species cattle–sheep array comparative genome hybridization
experiment to identify copy number variations (CNVs) in the sheep genome analysing ewes …