Mutagenesis in rice: the basis for breeding a new super plant
The high selection pressure applied in rice breeding since its domestication thousands of
years ago has caused a narrowing in its genetic variability. Obtaining new rice cultivars …
years ago has caused a narrowing in its genetic variability. Obtaining new rice cultivars …
The CRISPR/Cas revolution continues: from efficient gene editing for crop breeding to plant synthetic biology
Since the discovery that nucleases of the bacterial CRISPR (clustered regularly interspaced
palindromic repeat)‐associated (Cas) system can be used as easily programmable tools for …
palindromic repeat)‐associated (Cas) system can be used as easily programmable tools for …
The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable …
The CRISPR/C as nuclease is becoming a major tool for targeted mutagenesis in
eukaryotes by inducing double‐strand breaks (DSB s) at pre‐selected genomic sites that are …
eukaryotes by inducing double‐strand breaks (DSB s) at pre‐selected genomic sites that are …
Mutational signatures of non‐homologous and polymerase theta‐mediated end‐joining in embryonic stem cells
J Schimmel, H Kool, R van Schendel… - The EMBO journal, 2017 - embopress.org
Cells employ potentially mutagenic DNA repair mechanisms to avoid the detrimental effects
of chromosome breaks on cell survival. While classical non‐homologous end‐joining …
of chromosome breaks on cell survival. While classical non‐homologous end‐joining …
Genetic basis and detection of unintended effects in genetically modified crop plants
GS Ladics, A Bartholomaeus, P Bregitzer… - Transgenic …, 2015 - Springer
In January 2014, an international meeting sponsored by the International Life Sciences
Institute/Health and Environmental Sciences Institute and the Canadian Food Inspection …
Institute/Health and Environmental Sciences Institute and the Canadian Food Inspection …
Regulation of error-prone DNA double-strand break repair and its impact on genome evolution
T Hanscom, M McVey - Cells, 2020 - mdpi.com
Double-strand breaks are one of the most deleterious DNA lesions. Their repair via error-
prone mechanisms can promote mutagenesis, loss of genetic information, and deregulation …
prone mechanisms can promote mutagenesis, loss of genetic information, and deregulation …
Insertions and deletions: Computational methods, evolutionary dynamics, and biological applications
Insertions and deletions constitute the second most important source of natural genomic
variation. Insertions and deletions make up to 25% of genomic variants in humans and are …
variation. Insertions and deletions make up to 25% of genomic variants in humans and are …
BRCA1-associated structural variations are a consequence of polymerase theta-mediated end-joining
JA Kamp, R Van Schendel, IW Dilweg… - Nature …, 2020 - nature.com
Failure to preserve the integrity of the genome is a hallmark of cancer. Recent studies have
revealed that loss of the capacity to repair DNA breaks via homologous recombination (HR) …
revealed that loss of the capacity to repair DNA breaks via homologous recombination (HR) …
Graph-based pangenomics maximizes genotyping density and reveals structural impacts on fungal resistance in melon
The genomic sequences segregating in experimental populations are often highly divergent
from the community reference and from one another. Such divergence is problematic under …
from the community reference and from one another. Such divergence is problematic under …
Small tandem DNA duplications result from CST-guided Pol α-primase action at DNA break termini
J Schimmel, N Muñoz-Subirana, H Kool… - Nature …, 2021 - nature.com
Small tandem duplications of DNA occur frequently in the human genome and are
implicated in the aetiology of certain human cancers. Recent studies have suggested that …
implicated in the aetiology of certain human cancers. Recent studies have suggested that …