Evaluation of serverless computing for scalable execution of a joint variant calling workflow
Advances in whole-genome sequencing have greatly reduced the cost and time of obtaining
raw genetic information, but the computational requirements of analysis remain a challenge …
raw genetic information, but the computational requirements of analysis remain a challenge …
Singleton variants dominate the genetic architecture of human gene expression
The vast majority of human mutations have minor allele frequencies (MAF) under 1%, with
the plurality observed only once (ie,“singletons”). While Mendelian diseases are …
the plurality observed only once (ie,“singletons”). While Mendelian diseases are …
The application of deep learning for the classification of correct and incorrect SNP genotypes from whole-genome DNA sequencing pipelines
A downside of next-generation sequencing technology is the high technical error rate. We
built a tool, which uses array-based genotype information to classify next-generation …
built a tool, which uses array-based genotype information to classify next-generation …
Time-Series Expression Profile Analysis of Post-Traumatic Joint Contracture in Rats at the Early Stages of the Healing Process
Y Zhang, Z Wu, S Lu, M Lin, X Yue… - Journal of Inflammation …, 2023 - Taylor & Francis
Objective This study aimed to characterize the gene expression profile at the early stages of
the healing process of post-traumatic joint contracture (PTJC). Methods Twelve rats were …
the healing process of post-traumatic joint contracture (PTJC). Methods Twelve rats were …
Evaluating and improving next generation sequencing performance in the absence of gold standard
Y Zhai - 2023 - theses.hal.science
Evaluating next-generation sequencing (NGS) performance suffers frequently from the
absence of gold standard. Without gold standard, researchers often carry out replicates from …
absence of gold standard. Without gold standard, researchers often carry out replicates from …
Évaluation de l'imputation des données génétiques Canadiennes-Françaises
J Pelletier - 2022 - papyrus.bib.umontreal.ca
L'imputation est désormais un outil essentiel dans l'analyse des études d'association à
l'échelle du génome, permettant l'estimation de génotypes à des positions variables du …
l'échelle du génome, permettant l'estimation de génotypes à des positions variables du …
Whole-genome Sequencing: From Samples to Variants and Beyond
JM Lorenzo-Salazar, A Muñnoz-Barrera… - Bioinformatics and …, 2021 - taylorfrancis.com
This chapter presents an outline of the basic wet lab procedures to prepare the sample's
DNA for whole-genome sequencing (WGS). It follows an overview and benefits of the …
DNA for whole-genome sequencing (WGS). It follows an overview and benefits of the …
[引用][C] ΜΕΘΟΔΟΙ ΚΑΙ ΕΦΑΡΜΟΓΕΣ NGS ΣΤΗΝ ΕΝΤΕΡΙΚΗ ΜΙΚΡΟΧΛΩΡΙΔΑ ΚΑΙ ΣΤΟΝ ΚΑΡΚΙΝΟ ΤΟΥ ΠΑΧΕΟΣ ΕΝΤΕΡΟΥ
Α ΜΟΥΧΤΑΡΗ-ΞΥΛΟΓΙΑΝΝΗ