Natural product-derived phytochemicals as potential agents against coronaviruses: A review

JS Mani, JB Johnson, JC Steel, DA Broszczak… - Virus research, 2020 - Elsevier
Coronaviruses are responsible for a growing economic, social and mortality burden, as the
causative agent of diseases such as severe acute respiratory syndrome (SARS), Middle …

Machine learning directed drug formulation development

P Bannigan, M Aldeghi, Z Bao, F Häse… - Advanced Drug Delivery …, 2021 - Elsevier
Abstract Machine learning (ML) has enabled ground-breaking advances in the healthcare
and pharmaceutical sectors, from improvements in cancer diagnosis, to the identification of …

[HTML][HTML] Modeling the expansion of virtual screening libraries

J Lyu, JJ Irwin, BK Shoichet - Nature chemical biology, 2023 - nature.com
Recently,'tangible'virtual libraries have made billions of molecules readily available.
Prioritizing these molecules for synthesis and testing demands computational approaches …

[HTML][HTML] Best practices for alchemical free energy calculations [article v1. 0]

ASJS Mey, BK Allen, HEB Macdonald… - Living journal of …, 2020 - ncbi.nlm.nih.gov
Alchemical free energy calculations are a useful tool for predicting free energy differences
associated with the transfer of molecules from one environment to another. The hallmark of …

[HTML][HTML] Potential therapeutic effects of dipyridamole in the severely ill patients with COVID-19

X Liu, Z Li, S Liu, J Sun, Z Chen, M Jiang… - … Pharmaceutica Sinica B, 2020 - Elsevier
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection can cause acute
respiratory distress syndrome, hypercoagulability, hypertension, and multiorgan dysfunction …

[HTML][HTML] Non-fluorinated non-solvating cosolvent enabling superior performance of lithium metal negative electrode battery

J Moon, DO Kim, L Bekaert, M Song, J Chung… - Nature …, 2022 - nature.com
The growth of dendrites on lithium metal electrodes is problematic because it causes
irreversible capacity loss and safety hazards. Localised high-concentration electrolytes …

Identify potent SARS-CoV-2 main protease inhibitors via accelerated free energy perturbation-based virtual screening of existing drugs

Z Li, X Li, YY Huang, Y Wu, R Liu… - Proceedings of the …, 2020 - National Acad Sciences
The COVID-19 pandemic caused by severe acute respiratory syndrome coronavirus 2
(SARS-CoV-2) has become a global crisis. There is no therapeutic treatment specific for …

Enhancing hit discovery in virtual screening through absolute protein–ligand binding free-energy calculations

W Chen, D Cui, SV Jerome, M Michino… - Journal of Chemical …, 2023 - ACS Publications
In the hit identification stage of drug discovery, a diverse chemical space needs to be
explored to identify initial hits. Contrary to empirical scoring functions, absolute protein …

Assessing the performance of MM/PBSA and MM/GBSA methods. 7. Entropy effects on the performance of end-point binding free energy calculation approaches

H Sun, L Duan, F Chen, H Liu, Z Wang, P Pan… - Physical Chemistry …, 2018 - pubs.rsc.org
Entropy effects play an important role in drug–target interactions, but the entropic
contribution to ligand-binding affinity is often neglected by end-point binding free energy …

A role for quercetin in coronavirus disease 2019 (COVID‐19)

G Derosa, P Maffioli, A D'Angelo… - Phytotherapy …, 2021 - Wiley Online Library
Several months ago, an outbreak of pneumonia of unknown aetiology was detected in
Wuhan City (China) and the aetiological agent of the atypical pneumonia was isolated by …