Practical application of the linkage disequilibrium method for estimating contemporary effective population size: A review
RS Waples - Molecular Ecology Resources, 2024 - Wiley Online Library
The method to estimate contemporary effective population size (N e) based on patterns of
linkage disequilibrium (LD) at unlinked loci has been widely applied to natural and …
linkage disequilibrium (LD) at unlinked loci has been widely applied to natural and …
What Is Ne, Anyway?
RS Waples - Journal of Heredity, 2022 - academic.oup.com
Few doubt that effective population size (N e) is one of the most important parameters in
evolutionary biology, but how many can say they really understand the concept? N e is the …
evolutionary biology, but how many can say they really understand the concept? N e is the …
Celebrating Mendel, McClintock, and Darlington: on end-to-end chromosome fusions and nested chromosome fusions
MA Lysak - The Plant Cell, 2022 - academic.oup.com
The evolution of eukaryotic genomes is accompanied by fluctuations in chromosome
number, reflecting cycles of chromosome number increase (polyploidy and centric fissions) …
number, reflecting cycles of chromosome number increase (polyploidy and centric fissions) …
3D chromatin remodelling in the germ line modulates genome evolutionary plasticity
L Álvarez-González, F Burden, D Doddamani… - Nature …, 2022 - nature.com
Chromosome folding has profound impacts on gene regulation, whose evolutionary
consequences are far from being understood. Here we explore the relationship between 3D …
consequences are far from being understood. Here we explore the relationship between 3D …
Pseudoreplication in genomic‐scale data sets
In genomic‐scale data sets, loci are closely packed within chromosomes and hence provide
correlated information. Averaging across loci as if they were independent creates …
correlated information. Averaging across loci as if they were independent creates …
Comparative linkage mapping uncovers recombination suppression across massive chromosomal inversions associated with local adaptation in Atlantic silversides
The role of recombination in genome evolution has long been studied in theory, but until
recently empirical investigations had been limited to a small number of model species. Here …
recently empirical investigations had been limited to a small number of model species. Here …
Chromosome size affects sequence divergence between species through the interplay of recombination and selection
The structure of the genome shapes the distribution of genetic diversity and sequence
divergence. To investigate how the relationship between chromosome size and …
divergence. To investigate how the relationship between chromosome size and …
Polyploidy does not control all: Lineage‐specific average chromosome length constrains genome size evolution in ferns
HM Liu, L Ekrt, P Koutecky, J Pellicer… - … of Systematics and …, 2019 - Wiley Online Library
Recent studies investigating the evolution of genome size diversity in ferns have shown that
they have a distinctive genome profile compared with other land plants. Ferns are typically …
they have a distinctive genome profile compared with other land plants. Ferns are typically …
[PDF][PDF] Synteny-Based Genome Assembly for 16 Species of Heliconius Butterflies, and an Assessment of Structural Variation across the Genus
Abstract Heliconius butterflies (Lepidoptera: Nymphalidae) are a group of 48 neotropical
species widely studied in evolutionary research. Despite the wealth of genomic data …
species widely studied in evolutionary research. Despite the wealth of genomic data …
Making a long story short: noncoding RNAs and chromosome change
JD Brown, SE Mitchell, RJ O'neill - Heredity, 2012 - nature.com
As important as the events that influence selection for specific chromosome types in the
derivation of novel karyotypes, are the events that initiate the changes in chromosome …
derivation of novel karyotypes, are the events that initiate the changes in chromosome …