Design of novel FN3 domains with high stability by a consensus sequence approach

SA Jacobs, MD Diem, J Luo, A Teplyakov… - … , Design & Selection, 2012 - academic.oup.com
The use of consensus design to produce stable proteins has been applied to numerous
structures and classes of proteins. Here, we describe the engineering of novel FN3 domains …

[图书][B] Introduction to proteins: structure, function, and motion

A Kessel, N Ben-Tal - 2018 - taylorfrancis.com
Introduction to Proteins provides a comprehensive and state-of-the-art introduction to the
structure, function, and motion of proteins for students, faculty, and researchers at all levels …

Chromatin unfolding by epigenetic modifications explained by dramatic impairment of internucleosome interactions: a multiscale computational study

R Collepardo-Guevara, G Portella… - Journal of the …, 2015 - ACS Publications
Histone tails and their epigenetic modifications play crucial roles in gene expression
regulation by altering the architecture of chromatin. However, the structural mechanisms by …

Terminal repeats impact collagen triple-helix stability through hydrogen bonding

Y Qi, D Zhou, JL Kessler, R Qiu, SM Yu, G Li, Z Qin… - Chemical …, 2022 - pubs.rsc.org
Nearly 30% of human proteins have tandem repeating sequences. Structural understanding
of the terminal repeats is well-established for many repeat proteins with the common α-helix …

Effects of terminal tripeptide units on mechanical properties of collagen triple helices

M Masrouri, Z Qin - Extreme Mechanics Letters, 2023 - Elsevier
Collagen, a vital protein that provides strength to various body tissues, has a triple helix
structure containing three polypeptide chains. The chains are composed mostly of a …

The Hsp70 interdomain linker is a dynamic switch that enables allosteric communication between two structured domains

CA English, W Sherman, W Meng… - Journal of Biological …, 2017 - ASBMB
Hsp70 3 molecular chaperones play key roles in cellular protein homeostasis by binding to
exposed hydrophobic regions of incompletely folded or aggregated proteins. This crucial …

Prediction and analysis of protein solubility using a novel scoring card method with dipeptide composition

HL Huang, P Charoenkwan, TF Kao, HC Lee… - BMC …, 2012 - Springer
Background Existing methods for predicting protein solubility on overexpression in
Escherichia coli advance performance by using ensemble classifiers such as two-stage …

A systematic analysis of the beta hairpin motif in the Protein Data Bank

CD DuPai, BW Davies, CO Wilke - Protein Science, 2021 - Wiley Online Library
The beta hairpin motif is a ubiquitous protein structural motif that can be found in molecules
across the tree of life. This motif, which is also popular in synthetically designed proteins and …

Aerodynamics and the role of the earth's electric field in the spiders' ballooning flight

M Cho - Journal of Comparative Physiology A, 2021 - Springer
Some spiders aerially disperse relying on their fine fibres. This behaviour has been known
as 'ballooning'. Observations on the ballooning behaviour of spiders have a long history and …

Position-specific propensities of amino acids in the β-strand

N Bhattacharjee, P Biswas - BMC structural biology, 2010 - Springer
Background Despite the importance of β-strands as main building blocks in proteins, the
propensity of amino acid in β-strands is not well-understood as it has been more difficult to …