A logically reversible double Feynman gate with molecular engineered bacteria arranged in an artificial neural network-type architecture

R Srivastava, S Bagh - ACS Synthetic Biology, 2022 - ACS Publications
Reversible logic gates are the key components of reversible computing that map inputs and
outputs in a certain one-to-one pattern so that the output signals can reveal the pattern of the …

Design, fabrication, and device chemistry of a 3-input-3-output synthetic genetic combinatorial logic circuit with a 3-input AND gate in a single bacterial cell

D Bonnerjee, S Mukhopadhyay, S Bagh - Bioconjugate Chemistry, 2019 - ACS Publications
Advancement of in-cell molecular computation requires multi-input-multi-output genetic logic
devices. However, increased physical size, a higher number of molecular interactions, cross …

Synthetic Genetic Reversible Feynman Gate in a Single E. coli Cell and Its Application in Bacterial to Mammalian Cell Information Transfer

R Srivastava, K Sarkar, D Bonnerjee… - ACS Synthetic …, 2022 - ACS Publications
Reversible computing is a nonconventional form of computing where the inputs and outputs
are mapped in a unique one-to-one fashion. Reversible logic gates in single living cells …

Lego-like Mixing and Matching of Engineered Bacteria Configure Full Subtractor and Adder Through an Artificial Neural Network Type Architecture

D Bonnerjee, S Chakraborty, S Bagh - bioRxiv, 2023 - biorxiv.org
One of the long-term goals of synthetic bioengineering is to create configurable and
programmable biological systems by just mixing and matching “LEGO”-like bio-modules …

Processing two environmental chemical signals with a synthetic genetic IMPLY gate, a 2‐input‐2‐output integrated logic circuit, and a process pipeline to optimize its …

S Mukhopadhyay, K Sarkar… - Biotechnology and …, 2020 - Wiley Online Library
Synthetic genetic devices can perform molecular computation in living bacteria, which may
sense more than one environmental chemical signal, perform complex signal processing in …

A single layer artificial neural network type architecture with molecular engineered bacteria for complex conventional and reversible computing

K Sarkar, D Bonnerjee, R Srivastava, S Bagh - BioRxiv, 2021 - biorxiv.org
Here, we adapted the basic concept of artificial neural networks (ANN) and experimentally
demonstrate a broadly applicable single layer ANN type architecture with molecular …

The differences of prokaryotic pan-genome analysis on complete genomes and simulated metagenome-assembled genomes

T Li - 2021 - digitalcommons.unl.edu
Metagenomic assembly is often used in microbiome research. In metagenomic assembly,
contigs are binned based on the shared nucleotide composition. These contig bins are …

A single layer artificial neural network with engineered bacteria

K Sarkar, D Bonnerjee, S Bagh - arXiv preprint arXiv:2001.00792, 2020 - arxiv.org
The abstract mathematical rules of artificial neural network (ANN) are implemented through
computation using electronic computers, photonics and in-vitro DNA computation. Here we …

Configurable Full Subtractor and Adder by Lego-like Mixing and Matching of Engineered Bacteria in an Artificial Neural Network Type Architecture

S Bagh, D Bonnerjee, S Chakraborty - 2023 - researchsquare.com
One of the long-term goals of synthetic bioengineering is to create configurable and
programmable biological systems by just mixing and matching" LEGO"-like bio-modules …