[HTML][HTML] Cytoplasmic RNA decay pathways-Enzymes and mechanisms
A Łabno, R Tomecki, A Dziembowski - Biochimica et Biophysica Acta (BBA) …, 2016 - Elsevier
RNA decay plays a crucial role in post-transcriptional regulation of gene expression. Work
conducted over the last decades has defined the major mRNA decay pathways, as well as …
conducted over the last decades has defined the major mRNA decay pathways, as well as …
Feedback regulation of ribosome assembly
J de la Cruz, F Gómez-Herreros, O Rodríguez-Galán… - Current genetics, 2018 - Springer
Ribosome biogenesis is a crucial process for growth and constitutes the major consumer of
cellular resources. This pathway is subjected to very stringent regulation to ensure correct …
cellular resources. This pathway is subjected to very stringent regulation to ensure correct …
Arabidopsis mRNA decay landscape arises from specialized RNA decay substrates, decapping-mediated feedback, and redundancy
RS Sorenson, MJ Deshotel… - Proceedings of the …, 2018 - National Acad Sciences
The decay of mRNA plays a vital role in modulating mRNA abundance, which, in turn,
influences cellular and organismal processes. In plants and metazoans, three distinct …
influences cellular and organismal processes. In plants and metazoans, three distinct …
Transcription dynamics regulate poly (A) tails and expression of the RNA degradation machinery to balance mRNA levels
Gene expression is regulated by the rates of synthesis and degradation of mRNAs, but how
these processes are coordinated is poorly understood. Here, we show that reduced …
these processes are coordinated is poorly understood. Here, we show that reduced …
Structure of the 80S ribosome–Xrn1 nuclease complex
Messenger RNA (mRNA) homeostasis represents an essential part of gene expression, in
which the generation of mRNA by RNA polymerase is counter-balanced by its degradation …
which the generation of mRNA by RNA polymerase is counter-balanced by its degradation …
XRN1 stalling in the 5'UTR of Hepatitis C virus and Bovine Viral Diarrhea virus is associated with dysregulated host mRNA stability
SL Moon, JG Blackinton, JR Anderson… - PLoS …, 2015 - journals.plos.org
We demonstrate that both Hepatitis C virus (HCV) and Bovine Viral Diarrhea virus (BVDV)
contain regions in their 5'UTRs that stall and repress the enzymatic activity of the cellular 5' …
contain regions in their 5'UTRs that stall and repress the enzymatic activity of the cellular 5' …
Size-dependent modulation of graphene oxide–aptamer interactions for an amplified fluorescence-based detection of aflatoxin B 1 with a tunable dynamic range
Aflatoxin B1 (AFB1) is a common toxin found in many foods. While AFB1 sensors have been
reported, few studies have shown amplified detection with tunable dynamic ranges. We …
reported, few studies have shown amplified detection with tunable dynamic ranges. We …
The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins
B Blasco-Moreno, L de Campos-Mata… - Nature …, 2019 - nature.com
Abstract The highly conserved 5'–3'exonuclease Xrn1 regulates gene expression in
eukaryotes by coupling nuclear DNA transcription to cytosolic mRNA decay. By integrating …
eukaryotes by coupling nuclear DNA transcription to cytosolic mRNA decay. By integrating …
Viral nucleases induce an mRNA degradation-transcription feedback loop in mammalian cells
E Abernathy, S Gilbertson, R Alla, B Glaunsinger - Cell host & microbe, 2015 - cell.com
Gamma-herpesviruses encode a cytoplasmic mRNA-targeting endonuclease, SOX, that
cleaves most cellular mRNAs. Cleaved fragments are subsequently degraded by the cellular …
cleaves most cellular mRNAs. Cleaved fragments are subsequently degraded by the cellular …
Transcription feedback dynamics in the wake of cytoplasmic mRNA degradation shutdown
A Chappleboim, D Joseph-Strauss… - Nucleic acids …, 2022 - academic.oup.com
In the last decade, multiple studies demonstrated that cells maintain a balance of mRNA
production and degradation, but the mechanisms by which cells implement this balance …
production and degradation, but the mechanisms by which cells implement this balance …