Experimental design, population dynamics, and diversity in microbial experimental evolution

B Van den Bergh, T Swings, M Fauvart… - … and Molecular Biology …, 2018 - Am Soc Microbiol
In experimental evolution, laboratory-controlled conditions select for the adaptation of
species, which can be monitored in real time. Despite the current popularity of such …

Adaptive value of high mutation rates of RNA viruses: separating causes from consequences

SF Elena, R Sanjuán - Journal of virology, 2005 - Am Soc Microbiol
As a consequence of the lack of proofreading activity of RNA virus polymerases, new viral
genetic variants are constantly created. RNA viruses readily adapt to changing …

The evolutionary genetics of canalization

T Flatt - The Quarterly review of biology, 2005 - journals.uchicago.edu
Evolutionary genetics has recently made enormous progress in understanding how genetic
variation maps into phenotypic variation. However, why some traits are phenotypically …

Evolution and emergence of plant viruses

SF Elena, A Fraile, F García-Arenal - Advances in virus research, 2014 - Elsevier
Viruses are common agents of plant infectious diseases. During last decades, worldwide
agriculture production has been compromised by a series of epidemics caused by new …

Quantitative analyses of empirical fitness landscapes

IG Szendro, MF Schenk, J Franke, J Krug… - Journal of Statistical …, 2013 - iopscience.iop.org
The concept of a fitness landscape is a powerful metaphor that offers insight into various
aspects of evolutionary processes and guidance for the study of evolution. Until recently …

Theory of lethal mutagenesis for viruses

JJ Bull, R Sanjuan, CO Wilke - Journal of virology, 2007 - Am Soc Microbiol
Mutation is the basis of adaptation. Yet, most mutations are detrimental, and elevating
mutation rates will impair a population's fitness in the short term. The latter realization has …

The evolution of sex: empirical insights into the roles of epistasis and drift

JAGM De Visser, SF Elena - Nature Reviews Genetics, 2007 - nature.com
Despite many years of theoretical and experimental work, the explanation for why sex is so
common as a reproductive strategy continues to resist understanding. Recent empirical work …

The causes of epistasis

JAGM De Visser, TF Cooper… - Proceedings of the …, 2011 - royalsocietypublishing.org
Since Bateson's discovery that genes can suppress the phenotypic effects of other genes,
gene interactions—called epistasis—have been the topic of a vast research effort. Systems …

The evolutionary genetics of emerging viruses

EC Holmes - Annu. Rev. Ecol. Evol. Syst., 2009 - annualreviews.org
RNA viruses are the main agents of emerging disease. To understand how RNA viruses are
able to jump species boundaries and spread in new hosts it is essential to determine the …

Sexual reproduction selects for robustness and negative epistasis in artificial gene networks

RBR Azevedo, R Lohaus, S Srinivasan, KK Dang… - Nature, 2006 - nature.com
The mutational deterministic hypothesis for the origin and maintenance of sexual
reproduction posits that sex enhances the ability of natural selection to purge deleterious …