Mapping and analysis of quantitative trait loci in experimental populations

RW Doerge - Nature Reviews Genetics, 2002 - nature.com
Simple statistical methods for the study of quantitative trait loci (QTL), such as analysis of
variance, have given way to methods that involve several markers and high-resolution …

Molecular breeding to overcome biotic stresses in soybean: update

N Tripathi, MK Tripathi, S Tiwari, DK Payasi - Plants, 2022 - mdpi.com
Soybean (Glycine max (L.) Merr.) is an important leguminous crop and biotic stresses are a
global concern for soybean growers. In recent decades, significant development has been …

[图书][B] A Guide to QTL Mapping with R/qtl

KW Broman, S Sen - 2009 - Springer
QTL are quantitative trait loci: genetic loci that contribute to variation in a quantitative trait.
QTL mapping is the effort to identify QTL through an experimental cross. In this book, we …

A modified algorithm for the improvement of composite interval mapping

H Li, G Ye, J Wang - Genetics, 2007 - academic.oup.com
Composite interval mapping (CIM) is the most commonly used method for mapping
quantitative trait loci (QTL) with populations derived from biparental crosses. However, the …

Estimating the integrated likelihood via posterior simulation using the harmonic mean identity

AE Raftery, MA Newton, JM Satagopan, PN Krivitsky - 2006 - biostats.bepress.com
The integrated likelihood (also called the marginal likelihood or the normalizing constant) is
a central quantity in Bayesian model selection and model averaging. It is defined as the …

[PDF][PDF] QTL Cartographer, version 1.17

CJ Basten, BS Weir, ZB Zeng - Department of Statistics, North …, 2002 - researchgate.net
The programs described here work under various operating systems. They have been tested
under three main classes of sytems: We refer to them as Windows, Macintosh and UNIX …

A cautiously optimistic vision for marker-assisted breeding

N Dale Young - Molecular breeding, 1999 - Springer
Even though marker-assisted selection now plays a prominent role in the field of plant
breeding, examples of successful, practical outcomes are rare. It is clear that DNA markers …

A model selection approach for the identification of quantitative trait loci in experimental crosses

KW Broman, TP Speed - Journal of the Royal Statistical Society …, 2002 - academic.oup.com
We consider the problem of identifying the genetic loci (called quantitative trait loci (QTLs))
contributing to variation in a quantitative trait, with data on an experimental cross. A large …

Mapping quantitative trait loci in plants: uses and caveats for evolutionary biology

R Mauricio - Nature Reviews Genetics, 2001 - nature.com
Gregor Mendel was either clever or lucky enough to study traits of simple inheritance in his
pea plants; however, many plant characters of interest to modern geneticists are decidedly …

Review of statistical methods for QTL mapping in experimental crosses.

KW Broman - Lab animal, 2001 - europepmc.org
Identification of quantitative trait loci (QTLs) in experimental animals is critical for
understanding the biochemical bases of complex traits, and thus for the identification of drug …