Comparing the performance of 12S mitochondrial primers for fish environmental DNA across ecosystems

A Polanco F, E Richards, B Flück, A Valentini… - Environmental …, 2021 - Wiley Online Library
Through the development of environmental DNA (eDNA) metabarcoding, in situ monitoring
of organisms is becoming easier and promises a revolution in our approaches to detect …

[HTML][HTML] Congruency between two traditional and eDNA-based sampling methods in characterising taxonomic and trait-based structure of fish communities and …

I Czeglédi, P Sály, A Specziár, B Preiszner… - Ecological …, 2021 - Elsevier
Recent developments in environmental DNA (eDNA) metabarcoding suggest that eDNA-
based representation of ecological communities can be a promising tool in both …

Spatio-temporal patterns of multi-trophic biodiversity and food-web characteristics uncovered across a river catchment using environmental DNA

RC Blackman, HC Ho, JC Walser… - Communications …, 2022 - nature.com
Accurate characterisation of ecological communities with respect to their biodiversity and
food-web structure is essential for conservation. However, combined empirical study of …

Modelling environmental DNA transport in rivers reveals highly resolved spatio-temporal biodiversity patterns

L Carraro, RC Blackman, F Altermatt - Scientific Reports, 2023 - nature.com
The ever-increasing threats to riverine ecosystems call for novel approaches for highly
resolved biodiversity assessments across taxonomic groups and spatio-temporal scales …

Combining a deep learning model with an optimization algorithm to detect the dispersal of the early stages of spotted butterfish in northern Vietnam under global …

ANT Do, HD Tran - Ecological Informatics, 2023 - Elsevier
Climate change and anthropogenic disturbances are growing more severe and have a
substantial impact on fish larval and juvenile dispersals, especially in an estuarine system …

Biomonitoring for watershed protection from a multiscale land-use perspective

K De Mello, RH Taniwaki, DR Macedo, CG Leal… - Diversity, 2023 - mdpi.com
The types and intensification of land use in the watershed affect the living organisms in
aquatic ecosystems differently; this impact will also vary according to temporal and spatial …

General principles for assignments of communities from eDNA: Open versus closed taxonomic databases

RC Blackman, JC Walser, L Rüber… - Environmental …, 2023 - Wiley Online Library
Metabarcoding of environmental DNA (eDNA) is a powerful tool for describing biodiversity,
such as finding keystone species or detecting invasive species in environmental samples …

Environmental DNA reveals a mismatch between diversity facets of Amazonian fishes in response to contrasting geographical, environmental and anthropogenic …

O Coutant, C Jézéquel, K Mokany… - Global Change …, 2023 - Wiley Online Library
Freshwater ecosystems are among the most endangered ecosystem in the world.
Understanding how human activities affect these ecosystems requires disentangling and …

Opportunities and inherent limits of using environmental DNA for population genetics

M Couton, F Viard, F Altermatt - Environmental DNA, 2023 - Wiley Online Library
Molecular techniques using DNA retrieved from community or environmental samples, in
particular environmental DNA (eDNA), are becoming increasingly popular for detecting …

Harnessing eDNA metabarcoding to investigate fish community composition and its seasonal changes in the Oslo fjord

CO Carvalho, W Gromstad, M Dunthorn, HE Karlsen… - Scientific Reports, 2024 - nature.com
In the face of global ecosystem changes driven by anthropogenic activities, effective
biomonitoring strategies are crucial for mitigating impacts on vulnerable aquatic habitats …