Ribosome profiling: global views of translation
NT Ingolia, JA Hussmann… - Cold Spring Harbor …, 2019 - cshperspectives.cshlp.org
The translation of messenger RNA (mRNA) into protein and the folding of the resulting
protein into an active form are prerequisites for virtually every cellular process and represent …
protein into an active form are prerequisites for virtually every cellular process and represent …
[HTML][HTML] Transcriptome-wide measurement of translation by ribosome profiling
NJ McGlincy, NT Ingolia - Methods, 2017 - Elsevier
Translation is one of the fundamental processes of life. It comprises the assembly of
polypeptides whose amino acid sequence corresponds to the codon sequence of an …
polypeptides whose amino acid sequence corresponds to the codon sequence of an …
[HTML][HTML] Transfer RNA modification and infection–implications for pathogenicity and host responses
C San Koh, LP Sarin - Biochimica et Biophysica Acta (BBA)-Gene …, 2018 - Elsevier
Transfer RNA (tRNA) molecules are sumptuously decorated with evolutionary conserved
post-transcriptional nucleoside modifications that are essential for structural stability and …
post-transcriptional nucleoside modifications that are essential for structural stability and …
Queuosine‐modified tRNAs confer nutritional control of protein translation
F Tuorto, C Legrand, C Cirzi, G Federico… - The EMBO …, 2018 - embopress.org
Global protein translation as well as translation at the codon level can be regulated by tRNA
modifications. In eukaryotes, levels of tRNA queuosinylation reflect the bioavailability of the …
modifications. In eukaryotes, levels of tRNA queuosinylation reflect the bioavailability of the …
The human methyltransferase ZCCHC4 catalyses N6-methyladenosine modification of 28S ribosomal RNA
RNA methylations are essential both for RNA structure and function, and are introduced by a
number of distinct methyltransferases (MTases). In recent years, N 6-methyladenosine …
number of distinct methyltransferases (MTases). In recent years, N 6-methyladenosine …
[HTML][HTML] Transcription-wide mapping of dihydrouridine reveals that mRNA dihydrouridylation is required for meiotic chromosome segregation
The epitranscriptome has emerged as a new fundamental layer of control of gene
expression. Nevertheless, the determination of the transcriptome-wide occupancy and …
expression. Nevertheless, the determination of the transcriptome-wide occupancy and …
Ncs2* mediates in vivo virulence of pathogenic yeast through sulphur modification of cytoplasmic transfer RNA
F Alings, K Scharmann, C Eggers… - Nucleic acids …, 2023 - academic.oup.com
Fungal pathogens threaten ecosystems and human health. Understanding the molecular
basis of their virulence is key to develop new treatment strategies. Here, we characterize …
basis of their virulence is key to develop new treatment strategies. Here, we characterize …
[HTML][HTML] The dual methyltransferase METTL13 targets N terminus and Lys55 of eEF1A and modulates codon-specific translation rates
ME Jakobsson, JM Małecki, L Halabelian… - Nature …, 2018 - nature.com
Eukaryotic elongation factor 1 alpha (eEF1A) delivers aminoacyl-tRNA to the ribosome and
thereby plays a key role in protein synthesis. Human eEF1A is subject to extensive post …
thereby plays a key role in protein synthesis. Human eEF1A is subject to extensive post …
Enzymatic or in vivo installation of propargyl groups in combination with click chemistry for the enrichment and detection of methyltransferase target sites in RNA
K Hartstock, BS Nilges, A Ovcharenko… - Angewandte Chemie …, 2018 - Wiley Online Library
Abstract m6A is the most abundant internal modification in eukaryotic mRNA. It is introduced
by METTL3‐METTL14 and tunes mRNA metabolism, impacting cell differentiation and …
by METTL3‐METTL14 and tunes mRNA metabolism, impacting cell differentiation and …
[HTML][HTML] Humans and other commonly used model organisms are resistant to cycloheximide-mediated biases in ribosome profiling experiments
Ribosome profiling measures genome-wide translation dynamics at sub-codon resolution.
Cycloheximide (CHX), a widely used translation inhibitor to arrest ribosomes in these …
Cycloheximide (CHX), a widely used translation inhibitor to arrest ribosomes in these …