Advances and challenges in cell biology for cultured meat
B Martins, A Bister, RGJ Dohmen… - Annual review of …, 2024 - annualreviews.org
Cultured meat is an emerging biotechnology that aims to produce meat from animal cell
culture, rather than from the raising and slaughtering of livestock, on environmental and …
culture, rather than from the raising and slaughtering of livestock, on environmental and …
Extracellular matrix: Brick and mortar in the skeletal muscle stem cell niche
SC Schüler, Y Liu, S Dumontier… - Frontiers in Cell and …, 2022 - frontiersin.org
The extracellular matrix (ECM) is an interconnected macromolecular scaffold occupying the
space between cells. Amongst other functions, the ECM provides structural support to …
space between cells. Amongst other functions, the ECM provides structural support to …
Benchmarking spatial and single-cell transcriptomics integration methods for transcript distribution prediction and cell type deconvolution
Spatial transcriptomics approaches have substantially advanced our capacity to detect the
spatial distribution of RNA transcripts in tissues, yet it remains challenging to characterize …
spatial distribution of RNA transcripts in tissues, yet it remains challenging to characterize …
Spatial mapping of the total transcriptome by in situ polyadenylation
Spatial transcriptomics reveals the spatial context of gene expression, but current methods
are limited to assaying polyadenylated (A-tailed) RNA transcripts. Here we demonstrate that …
are limited to assaying polyadenylated (A-tailed) RNA transcripts. Here we demonstrate that …
Single-cell and spatial transcriptomics identify a macrophage population associated with skeletal muscle fibrosis
G Coulis, D Jaime, C Guerrero-Juarez… - Science …, 2023 - science.org
Macrophages are essential for skeletal muscle homeostasis, but how their dysregulation
contributes to the development of fibrosis in muscle disease remains unclear. Here, we used …
contributes to the development of fibrosis in muscle disease remains unclear. Here, we used …
Integration mapping of cardiac fibroblast single-cell transcriptomes elucidates cellular principles of fibrosis in diverse pathologies
R Patrick, V Janbandhu, V Tallapragada, SSM Tan… - Science …, 2024 - science.org
Single-cell technology has allowed researchers to probe tissue complexity and dynamics at
unprecedented depth in health and disease. However, the generation of high-dimensionality …
unprecedented depth in health and disease. However, the generation of high-dimensionality …
[HTML][HTML] The neuroendocrine transition in prostate cancer is dynamic and dependent on ASCL1
Lineage plasticity is a hallmark of cancer progression that impacts therapy outcomes, yet the
mechanisms mediating this process remain unclear. Here, we introduce a versatile in vivo …
mechanisms mediating this process remain unclear. Here, we introduce a versatile in vivo …
[PDF][PDF] Single-nucleus profiling unveils a geroprotective role of the FOXO3 in primate skeletal muscle aging
Age-dependent loss of skeletal muscle mass and function is a feature of sarcopenia, and
increases the risk of many aging-related metabolic diseases. Here, we report phenotypic …
increases the risk of many aging-related metabolic diseases. Here, we report phenotypic …
DeepVelo: Single-cell transcriptomic deep velocity field learning with neural ordinary differential equations
Recent advances in single-cell sequencing technologies have provided unprecedented
opportunities to measure the gene expression profile and RNA velocity of individual cells …
opportunities to measure the gene expression profile and RNA velocity of individual cells …
A growth factor–expressing macrophage subpopulation orchestrates regenerative inflammation via GDF-15
A Patsalos, L Halasz, MA Medina-Serpas… - Journal of Experimental …, 2021 - rupress.org
Muscle regeneration is the result of the concerted action of multiple cell types driven by the
temporarily controlled phenotype switches of infiltrating monocyte–derived macrophages …
temporarily controlled phenotype switches of infiltrating monocyte–derived macrophages …