Recent advancements in molecular marker-assisted selection and applications in plant breeding programmes

N Hasan, S Choudhary, N Naaz, N Sharma… - Journal of Genetic …, 2021 - Elsevier
Background DNA markers improved the productivity and accuracy of classical plant
breeding by means of marker-assisted selection (MAS). The enormous number of …

Rice functional genomics: decades' efforts and roads ahead

R Chen, Y Deng, Y Ding, J Guo, J Qiu, B Wang… - Science China Life …, 2022 - Springer
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

W Wang, R Mauleon, Z Hu, D Chebotarov, S Tai, Z Wu… - Nature, 2018 - nature.com
Here we analyse genetic variation, population structure and diversity among 3,010 diverse
Asian cultivated rice (Oryza sativa L.) genomes from the 3,000 Rice Genomes Project. Our …

Rice SNP-seek database update: new SNPs, indels, and queries

L Mansueto, RR Fuentes, FN Borja… - Nucleic acids …, 2017 - academic.oup.com
We describe updates to the Rice SNP-Seek Database since its first release. We ran a new
SNP-calling pipeline followed by filtering that resulted in complete, base, filtered and core …

The stay-green trait

H Thomas, H Ougham - Journal of Experimental Botany, 2014 - academic.oup.com
Stay-green (sometimes staygreen) refers to the heritable delayed foliar senescence
character in model and crop plant species. In a cosmetic stay-green, a lesion interferes with …

Back to the future: revisiting MAS as a tool for modern plant breeding

JN Cobb, PS Biswas, JD Platten - Theoretical and Applied Genetics, 2019 - Springer
Key message New models for integration of major gene MAS with modern breeding
approaches stand to greatly enhance the reliability and efficiency of breeding, facilitating the …

Towards a whole‐genome sequence for rye (Secale cereale L.)

E Bauer, T Schmutzer, I Barilar, M Mascher… - The Plant …, 2017 - Wiley Online Library
We report on a whole‐genome draft sequence of rye (Secale cereale L.). Rye is a diploid
Triticeae species closely related to wheat and barley, and an important crop for food and …

NAL1 allele from a rice landrace greatly increases yield in modern indica cultivars

D Fujita, KR Trijatmiko, AG Tagle… - Proceedings of the …, 2013 - National Acad Sciences
Increasing crop production is essential for securing the future food supply in developing
countries in Asia and Africa as economies and populations grow. However, although the …

Season‐long characterization of high‐cannabinoid hemp (Cannabis sativa L.) reveals variation in cannabinoid accumulation, flowering time, and disease resistance

GM Stack, JA Toth, CH Carlson, AR Cala… - GCB …, 2021 - Wiley Online Library
Given the dramatic rise in high‐cannabinoid hemp (Cannabis sativa L.) production in the
last decade, there is an increasingly urgent need to characterize available germplasm and …

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database

A Bissett, A Fitzgerald, T Meintjes, PM Mele, F Reith… - GigaScience, 2016 - Springer
Background Microbial inhabitants of soils are important to ecosystem and planetary
functions, yet there are large gaps in our knowledge of their diversity and ecology. The …