Nucleus segmentation: towards automated solutions

R Hollandi, N Moshkov, L Paavolainen, E Tasnadi… - Trends in Cell …, 2022 - cell.com
Single nucleus segmentation is a frequent challenge of microscopy image processing, since
it is the first step of many quantitative data analysis pipelines. The quality of tracking single …

[HTML][HTML] Deep learning in computational dermatopathology of melanoma: A technical systematic literature review

D Sauter, G Lodde, F Nensa, D Schadendorf… - Computers in biology …, 2023 - Elsevier
Deep learning (DL) has become one of the major approaches in computational
dermatopathology, evidenced by a significant increase in this topic in the current literature …

Multi-modality artificial intelligence in digital pathology

Y Qiao, L Zhao, C Luo, Y Luo, Y Wu, S Li… - Briefings in …, 2022 - academic.oup.com
In common medical procedures, the time-consuming and expensive nature of obtaining test
results plagues doctors and patients. Digital pathology research allows using computational …

Open-source deep-learning software for bioimage segmentation

AM Lucas, PV Ryder, B Li, BA Cimini… - Molecular Biology of …, 2021 - Am Soc Cell Biol
Microscopy images are rich in information about the dynamic relationships among biological
structures. However, extracting this complex information can be challenging, especially …

[HTML][HTML] A user-friendly tool for cloud-based whole slide image segmentation with examples from renal histopathology

B Lutnick, D Manthey, JU Becker, B Ginley… - Communications …, 2022 - nature.com
Background Image-based machine learning tools hold great promise for clinical applications
in pathology research. However, the ideal end-users of these computational tools (eg …

[HTML][HTML] Publicly available datasets of breast histopathology H&E whole-slide images: A scoping review

M Tafavvoghi, LA Bongo, N Shvetsov… - Journal of Pathology …, 2024 - Elsevier
Advancements in digital pathology and computing resources have made a significant impact
in the field of computational pathology for breast cancer diagnosis and treatment. However …

[HTML][HTML] User-accessible machine learning approaches for cell segmentation and analysis in tissue

S Winfree - Frontiers in Physiology, 2022 - frontiersin.org
Advanced image analysis with machine and deep learning has improved cell segmentation
and classification for novel insights into biological mechanisms. These approaches have …

Focused active learning for histopathological image classification

A Schmidt, P Morales-Álvarez, LAD Cooper… - Medical Image …, 2024 - Elsevier
Active Learning (AL) has the potential to solve a major problem of digital pathology: the
efficient acquisition of labeled data for machine learning algorithms. However, existing AL …

[HTML][HTML] Implementation of digital technologies in the medicine of the future

T Rakhimov, M Mukhamediev - Futurity Medicine, 2022 - futurity-medicine.com
The parallel development of digital and telecommunication technologies in recent years has
created ample opportunities to improve traditional healthcare delivery systems. New models …

Hy-Fi: Hy brid Fi ve-Dimensional Parallel DNN Training on High-Performance GPU Clusters

A Jain, A Shafi, Q Anthony, P Kousha… - … Conference on High …, 2022 - Springer
Abstract Recent advances in High Performance Computing (HPC) enable Deep Learning
(DL) models to achieve state-of-the-art performance by exploiting multiple processors. Data …