Beware of docking!

YC Chen - Trends in pharmacological sciences, 2015 - cell.com
Docking is now routine in virtual screening or lead optimization for drug screening and
design. The number of papers related to docking has dramatically increased over the past …

The application of in silico drug-likeness predictions in pharmaceutical research

S Tian, J Wang, Y Li, D Li, L Xu, T Hou - Advanced drug delivery reviews, 2015 - Elsevier
The concept of drug-likeness, established from the analyses of the physiochemical
properties or/and structural features of existing small organic drugs or/and drug candidates …

Estimation of the size of drug-like chemical space based on GDB-17 data

PG Polishchuk, TI Madzhidov, A Varnek - Journal of computer-aided …, 2013 - Springer
The goal of this paper is to estimate the number of realistic drug-like molecules which could
ever be synthesized. Unlike previous studies based on exhaustive enumeration of molecular …

Computer-based de novo design of drug-like molecules

G Schneider, U Fechner - Nature Reviews Drug Discovery, 2005 - nature.com
Ever since the first automated de novo design techniques were conceived only 15 years
ago, the computer-based design of hit and lead structure candidates has emerged as a …

Statistical strategies for avoiding false discoveries in metabolomics and related experiments

DI Broadhurst, DB Kell - Metabolomics, 2006 - Springer
Many metabolomics, and other high-content or high-throughput, experiments are set up
such that the primary aim is the discovery of biomarker metabolites that can discriminate …

[引用][C] An Introduction to Chemoinformatics

AR Leach - 2007 - books.google.com
Chemoinformatics draws upon techniques from many disciplines including computer
science, mathematics, computational chemistry and data visualisation to tackle these …

On various metrics used for validation of predictive QSAR models with applications in virtual screening and focused library design

K Roy, I Mitra - Combinatorial chemistry & high throughput …, 2011 - ingentaconnect.com
Quantitative structure-activity relationships (QSARs) have important applications in drug
discovery research, environmental fate modeling, property prediction, etc. Validation has …

Combinatorial and high‐throughput materials science

WF Maier, K Stoewe, S Sieg - … chemie international edition, 2007 - Wiley Online Library
There is increasing acceptance of high‐throughput technologies for the discovery,
development, and optimization of materials and catalysts in industry. Over the years, the …

Multi-objective optimization methods in drug design

CA Nicolaou, N Brown - Drug Discovery Today: Technologies, 2013 - Elsevier
Drug discovery is a challenging multi-objective problem where numerous pharmaceutically
important objectives need to be adequately satisfied for a solution to be found. The problem …

Bioisosteric replacement and scaffold hopping in lead generation and optimization

SR Langdon, P Ertl, N Brown - Molecular informatics, 2010 - Wiley Online Library
Bioisosteric replacement and scaffold hopping are twin methods used in drug design to
improve the synthetic accessibility, potency and drug like properties of a compound and to …