Effects of molecular crowding on the structures, interactions, and functions of nucleic acids

S Nakano, D Miyoshi, N Sugimoto - Chemical reviews, 2014 - ACS Publications
Nucleic acids are excellent at recognizing complementary sequences through the formation
of Watson− Crick base pairs. Since the base pairing enables the highly selective …

SF1 and SF2 helicases: family matters

ME Fairman-Williams, UP Guenther… - Current opinion in …, 2010 - Elsevier
Helicases of the superfamily (SF) 1 and 2 are involved in virtually all aspects of RNA and
DNA metabolism. SF1 and SF2 helicases share a catalytic core with high structural …

Structure and mechanism of helicases and nucleic acid translocases

MR Singleton, MS Dillingham, DB Wigley - Annu. Rev. Biochem., 2007 - annualreviews.org
Helicases and translocases are a ubiquitous, highly diverse group of proteins that perform
an extraordinary variety of functions in cells. Consequently, this review sets out to define a …

Fork reversal and ssDNA accumulation at stalled replication forks owing to checkpoint defects

JM Sogo, M Lopes, M Foiani - Science, 2002 - science.org
Checkpoint-mediated control of replicating chromosomes is essential for preventing cancer.
In yeast, Rad53 kinase protects stalled replication forks from pathological rearrangements …

RecBCD enzyme and the repair of double-stranded DNA breaks

MS Dillingham, SC Kowalczykowski - Microbiology and Molecular …, 2008 - Am Soc Microbiol
SUMMARY The RecBCD enzyme of Escherichia coli is a helicase-nuclease that initiates the
repair of double-stranded DNA breaks by homologous recombination. It also degrades …

BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure

H Yang, PD Jeffrey, J Miller, E Kinnucan, Y Sun… - Science, 2002 - science.org
Mutations in the BRCA2 (breast cancer susceptibility gene 2) tumor suppressor lead to
chromosomal instability due to defects in the repair of double-strand DNA breaks (DSBs) by …

SSB as an organizer/mobilizer of genome maintenance complexes

RD Shereda, AG Kozlov, TM Lohman… - Critical reviews in …, 2008 - Taylor & Francis
When duplex DNA is altered in almost any way (replicated, recombined, or repaired), single
strands of DNA are usually intermediates, and single-stranded DNA binding (SSB) proteins …

Chromatin remodelling: the industrial revolution of DNA around histones

A Saha, J Wittmeyer, BR Cairns - Nature reviews Molecular cell biology, 2006 - nature.com
Chromatin remodellers are specialized multi-protein machines that enable access to
nucleosomal DNA by altering the structure, composition and positioning of nucleosomes. All …

Mechanisms of bacterial transcription termination

JW Roberts - Journal of molecular biology, 2019 - Elsevier
Bacterial transcription termination, described mostly for Escherichia coli, occurs in three
recognized ways: intrinsic termination, an activity only of the core RNAP enzyme and …

[HTML][HTML] Polyubiquitinated PCNA recruits the ZRANB3 translocase to maintain genomic integrity after replication stress

A Ciccia, AV Nimonkar, Y Hu, I Hajdu, YJ Achar, L Izhar… - Molecular cell, 2012 - cell.com
Completion of DNA replication after replication stress depends on PCNA, which undergoes
monoubiquitination to stimulate direct bypass of DNA lesions by specialized DNA …