A review of deep learning in medical imaging: Imaging traits, technology trends, case studies with progress highlights, and future promises

SK Zhou, H Greenspan, C Davatzikos… - Proceedings of the …, 2021 - ieeexplore.ieee.org
Since its renaissance, deep learning has been widely used in various medical imaging tasks
and has achieved remarkable success in many medical imaging applications, thereby …

[HTML][HTML] The sensitivity of diffusion MRI to microstructural properties and experimental factors

M Afzali, T Pieciak, S Newman, E Garyfallidis… - Journal of Neuroscience …, 2021 - Elsevier
Diffusion MRI is a non-invasive technique to study brain microstructure. Differences in the
microstructural properties of tissue, including size and anisotropy, can be represented in the …

Deep generative medical image harmonization for improving cross‐site generalization in deep learning predictors

VM Bashyam, J Doshi, G Erus… - Journal of Magnetic …, 2022 - Wiley Online Library
Background In the medical imaging domain, deep learning‐based methods have yet to see
widespread clinical adoption, in part due to limited generalization performance across …

Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps

KG Schilling, J Blaber, C Hansen, L Cai, B Rogers… - PloS one, 2020 - journals.plos.org
Diffusion magnetic resonance images may suffer from geometric distortions due to
susceptibility induced off resonance fields, which cause geometric mismatch with anatomical …

Fiber tractography bundle segmentation depends on scanner effects, vendor effects, acquisition resolution, diffusion sampling scheme, diffusion sensitization, and …

KG Schilling, CMW Tax, F Rheault, C Hansen, Q Yang… - Neuroimage, 2021 - Elsevier
When investigating connectivity and microstructure of white matter pathways of the brain
using diffusion tractography bundle segmentation, it is important to understand potential …

Image-encoded biological and non-biological variables may be used as shortcuts in deep learning models trained on multisite neuroimaging data

R Souza, M Wilms, M Camacho, GB Pike… - Journal of the …, 2023 - academic.oup.com
Objective This work investigates if deep learning (DL) models can classify originating site
locations directly from magnetic resonance imaging (MRI) scans with and without correction …

Diffusion mri with machine learning

D Karimi, SK Warfield - Imaging Neuroscience, 2024 - direct.mit.edu
Diffusion-weighted magnetic resonance imaging (dMRI) of the brain offers unique
capabilities including noninvasive probing of tissue microstructure and structural …

Deep learning reveals untapped information for local white-matter fiber reconstruction in diffusion-weighted MRI

V Nath, KG Schilling, P Parvathaneni… - Magnetic resonance …, 2019 - Elsevier
Purpose Diffusion-weighted magnetic resonance imaging (DW-MRI) is of critical importance
for characterizing in-vivo white matter. Models relating microarchitecture to observed DW …

A Unified Learning Model for Estimating Fiber Orientation Distribution Functions on Heterogeneous Multi-shell Diffusion-Weighted MRI

T Yao, N Newlin, P Kanakaraj, V Nath, LY Cai… - International Workshop …, 2023 - Springer
Diffusion-weighted (DW) MRI measures the direction and scale of the local diffusion process
in every voxel through its spectrum in q-space, typically acquired in one or more shells …

[HTML][HTML] Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context

LY Cai, HH Lee, NR Newlin, CI Kerley, P Kanakaraj… - bioRxiv, 2023 - ncbi.nlm.nih.gov
Diffusion MRI (dMRI) streamline tractography is the gold-standard for in vivo estimation of
white matter (WM) pathways in the brain. However, the high angular resolution dMRI …