[PDF][PDF] Human SMARCA5 is continuously required to maintain nucleosome spacing

ML Bomber, J Wang, Q Liu, KR Barnett, HM Layden… - Molecular cell, 2023 - cell.com
Genetic models suggested that SMARCA5 was required for DNA-templated events including
transcription, DNA replication, and DNA repair. We engineered a degron tag into the …

[PDF][PDF] PAX3-FOXO1 coordinates enhancer architecture, eRNA transcription, and RNA polymerase pause release at select gene targets

S Zhang, J Wang, Q Liu, WH McDonald, ML Bomber… - Molecular cell, 2022 - cell.com
Transcriptional control is a highly dynamic process that changes rapidly in response to
various cellular and extracellular cues, making it difficult to define the mechanism of …

EBF1 is continuously required for stabilizing local chromatin accessibility in pro-B cells

N Zolotarev, M Bayer… - Proceedings of the …, 2022 - National Acad Sciences
The establishment of de novo chromatin accessibility in lymphoid progenitors requires the
“pioneering” function of transcription factor (TF) early B cell factor 1 (EBF1), which binds to …

Transcriptional Synergy in Human Aortic Endothelial Cells is Vulnerable to Combination p300/CBP and BET Bromodomain Inhibition

RC Bracken, LM Davison, DP Buehler, ME Fulton… - iScience, 2024 - cell.com
Combinatorial signaling by proinflammatory cytokines synergizes to exacerbate toxicity to
cells and tissue injury during acute infections. To explore synergism at the gene regulatory …

[HTML][HTML] Mutant FOXO1 controls an oncogenic network via enhancer accessibility

HM Layden, JD Ellis, ML Bomber, LN Bartlett… - Cell Genomics, 2024 - cell.com
Transcriptional dysregulation is a hallmark of diffuse large B cell lymphoma (DLBCL), as
transcriptional regulators are frequently mutated. However, our mechanistic understanding …

SETD2 safeguards the genome against isochromosome formation

FM Mason, ES Kounlavong… - Proceedings of the …, 2023 - National Acad Sciences
Isochromosomes are mirror-imaged chromosomes with simultaneous duplication and
deletion of genetic material which may contain two centromeres to create isodicentric …

Lineage-specific canonical and non-canonical activity of EZH2 in advanced prostate cancer subtypes

VB Venkadakrishnan, AG Presser, R Singh, MA Booker… - 2024 - researchsquare.com
Enhancer of zeste homolog 2 (EZH2) is a histone methyltransferase and emerging
therapeutic target that is overexpressed in most castration resistant prostate cancers and …

The role of human SMARCA5 in chromatin structure and function

ML Bomber - 2023 - search.proquest.com
Genetic models suggested that SMARCA5 was required for DNA templated events including
transcription, DNA replication and DNA repair. We engineered a degron tag into the …

Mechanism of Transcriptional Control of Oncogenic Transcription Factor Fusions in Tumor Development

S Zhang - 2022 - search.proquest.com
Gene expression networks are perturbed in every human malignancy. One common way
that this occurs is through chromosomal translocation, such as t (8; 21) or t (2; 13), which …

Chemical-genetics refines transcription factor regulatory circuits

HM Layden, AE Johnson, SW Hiebert - Trends in Cancer, 2023 - cell.com
Transcriptional dysregulation is a key step in oncogenesis, but our understanding of
transcriptional control has relied on genetic approaches that are slow and allow for …