Deep learning for cellular image analysis

E Moen, D Bannon, T Kudo, W Graf, M Covert… - Nature …, 2019 - nature.com
Recent advances in computer vision and machine learning underpin a collection of
algorithms with an impressive ability to decipher the content of images. These deep learning …

Data‐driven materials science: status, challenges, and perspectives

L Himanen, A Geurts, AS Foster, P Rinke - Advanced Science, 2019 - Wiley Online Library
Data‐driven science is heralded as a new paradigm in materials science. In this field, data is
the new resource, and knowledge is extracted from materials datasets that are too big or …

[HTML][HTML] The NANOGrav 15 yr data set: Evidence for a gravitational-wave background

G Agazie, A Anumarlapudi, AM Archibald… - The Astrophysical …, 2023 - iopscience.iop.org
We report multiple lines of evidence for a stochastic signal that is correlated among 67
pulsars from the 15 yr pulsar timing data set collected by the North American Nanohertz …

The NANOGrav 15 yr data set: Observations and timing of 68 millisecond pulsars

G Agazie, MF Alam, A Anumarlapudi… - The Astrophysical …, 2023 - iopscience.iop.org
We present observations and timing analyses of 68 millisecond pulsars (MSPs) comprising
the 15 yr data set of the North American Nanohertz Observatory for Gravitational Waves …

Two remarkably luminous galaxy candidates at z≈ 10–12 revealed by JWST

RP Naidu, PA Oesch, P van Dokkum… - The Astrophysical …, 2022 - iopscience.iop.org
The first few 100 Myr at z> 10 mark the last major uncharted epoch in the history of the
universe, where only a single galaxy (GN-z11 at z≈ 11) is currently spectroscopically …

[HTML][HTML] PyMC: a modern, and comprehensive probabilistic programming framework in Python

O Abril-Pla, V Andreani, C Carroll, L Dong… - PeerJ Computer …, 2023 - peerj.com
PyMC is a probabilistic programming library for Python that provides tools for constructing
and fitting Bayesian models. It offers an intuitive, readable syntax that is close to the natural …

Modules for experiments in stellar astrophysics (MESA): time-dependent convection, energy conservation, automatic differentiation, and infrastructure

AS Jermyn, EB Bauer, J Schwab… - The Astrophysical …, 2023 - iopscience.iop.org
We update the capabilities of the open-knowledge software instrument Modules for
Experiments in Stellar Astrophysics (MESA). The new auto _ diff module implements …

AutoDock Vina 1.2. 0: New docking methods, expanded force field, and python bindings

J Eberhardt, D Santos-Martins… - Journal of chemical …, 2021 - ACS Publications
AutoDock Vina is arguably one of the fastest and most widely used open-source programs
for molecular docking. However, compared to other programs in the AutoDock Suite, it lacks …

A NICER view of the massive pulsar PSR J0740+ 6620 informed by radio timing and XMM-Newton spectroscopy

TE Riley, AL Watts, PS Ray, S Bogdanov… - The Astrophysical …, 2021 - iopscience.iop.org
We report on Bayesian estimation of the radius, mass, and hot surface regions of the
massive millisecond pulsar PSR J0740+ 6620, conditional on pulse-profile modeling of …

Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning

NF Greenwald, G Miller, E Moen, A Kong, A Kagel… - Nature …, 2022 - nature.com
A principal challenge in the analysis of tissue imaging data is cell segmentation—the task of
identifying the precise boundary of every cell in an image. To address this problem we …