Ancient DNA analysis

L Orlando, R Allaby, P Skoglund… - Nature reviews …, 2021 - nature.com
Although the first ancient DNA molecules were extracted more than three decades ago, the
first ancient nuclear genomes could only be characterized after high-throughput sequencing …

Animal domestication in the era of ancient genomics

LAF Frantz, DG Bradley, G Larson… - Nature Reviews Genetics, 2020 - nature.com
The domestication of animals led to a major shift in human subsistence patterns, from a
hunter–gatherer to a sedentary agricultural lifestyle, which ultimately resulted in the …

[HTML][HTML] Grey wolf genomic history reveals a dual ancestry of dogs

A Bergström, DWG Stanton, UH Taron, L Frantz… - Nature, 2022 - nature.com
The grey wolf (Canis lupus) was the first species to give rise to a domestic population, and
they remained widespread throughout the last Ice Age when many other large mammal …

Origins and genetic legacy of prehistoric dogs

A Bergström, L Frantz, R Schmidt, E Ersmark… - Science, 2020 - science.org
Dogs were the first domestic animal, but little is known about their population history and to
what extent it was linked to humans. We sequenced 27 ancient dog genomes and found that …

Genomic history and ecology of the geographic spread of rice

RM Gutaker, SC Groen, ES Bellis, JY Choi, IS Pires… - Nature plants, 2020 - nature.com
Rice (Oryza sativa) is one of the world's most important food crops, and is comprised largely
of japonica and indica subspecies. Here, we reconstruct the history of rice dispersal in Asia …

[HTML][HTML] A genome sequence from a modern human skull over 45,000 years old from Zlatý kůň in Czechia

K Prüfer, C Posth, H Yu, A Stoessel… - Nature ecology & …, 2021 - nature.com
Modern humans expanded into Eurasia more than 40,000 years ago following their
dispersal out of Africa. These Eurasians carried~ 2–3% Neanderthal ancestry in their …

[HTML][HTML] The genomic origins of the world's first farmers

N Marchi, L Winkelbach, I Schulz, M Brami… - Cell, 2022 - cell.com
The precise genetic origins of the first Neolithic farming populations in Europe and
Southwest Asia, as well as the processes and the timing of their differentiation, remain …

Descent, marriage, and residence practices of a 3,800-year-old pastoral community in Central Eurasia

J Blöcher, M Brami, IS Feinauer… - Proceedings of the …, 2023 - National Acad Sciences
Our understanding of prehistoric societal organization at the family level is still limited. Here,
we generated genome data from 32 individuals from an approximately 3,800-y-old burial …

Assembly of a pangenome for global cattle reveals missing sequences and novel structural variations, providing new insights into their diversity and evolutionary …

Y Zhou, L Yang, X Han, J Han, Y Hu, F Li… - Genome …, 2022 - genome.cshlp.org
A cattle pangenome representation was created based on the genome sequences of 898
cattle representing 57 breeds. The pangenome identified 83 Mb of sequence not found in …

[HTML][HTML] Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing

N Chen, X Xia, Q Hanif, F Zhang, R Dang… - Nature …, 2023 - nature.com
Indicine cattle, also referred to as zebu (Bos taurus indicus), play a central role in pastoral
communities across a wide range of agro-ecosystems, from extremely hot semiarid regions …