The landscape of genetic content in the gut and oral human microbiome
Despite substantial interest in the species diversity of the human microbiome and its role in
disease, the scale of its genetic diversity, which is fundamental to deciphering human …
disease, the scale of its genetic diversity, which is fundamental to deciphering human …
Survey and taxonomy of lossless graph compression and space-efficient graph representations
Various graphs such as web or social networks may contain up to trillions of edges.
Compressing such datasets can accelerate graph processing by reducing the amount of I/O …
Compressing such datasets can accelerate graph processing by reducing the amount of I/O …
Parallel Read Partitioning for Concurrent Assembly of Metagenomic Data
V Rengasamy, MT Kandemir… - 2018 IEEE 25th …, 2018 - ieeexplore.ieee.org
We present MetaPartMin and MetaPart, two new lightweight parallel metagenomic read
partitioning strategies. Metagenomic data partitioning can aid the concurrent de novo …
partitioning strategies. Metagenomic data partitioning can aid the concurrent de novo …
Improving metagenomic assemblies through data partitioning: a GC content approach
Assembling metagenomic data sequenced by NGS platforms poses significant
computational challenges, especially due to large volumes of data, sequencing errors, and …
computational challenges, especially due to large volumes of data, sequencing errors, and …
[图书][B] Engineering High Performance Workflows for End-to-End Acceleration of Genomic Applications
V Rengasamy - 2018 - search.proquest.com
Faster and cheaper sequencing methods as well as metagenome sequencing has led to a
drastic increase in the quantity of the sequenced data. Genetic variant detection and de …
drastic increase in the quantity of the sequenced data. Genetic variant detection and de …