Hydroxyl radical protein footprinting: a mass spectrometry-based structural method for studying the higher order structure of proteins
A McKenzie-Coe, NS Montes, LM Jones - Chemical reviews, 2021 - ACS Publications
Hydroxyl radical protein footprinting (HRPF) coupled to mass spectrometry has been
successfully used to investigate a plethora of protein-related questions. The method, which …
successfully used to investigate a plethora of protein-related questions. The method, which …
Redox proteomics: chemical principles, methodological approaches and biological/biomedical promises
A Bachi, I Dalle-Donne, A Scaloni - Chemical reviews, 2013 - ACS Publications
Inevitable byproducts of aerobic metabolism are free radicals and other highly reactive
oxidants and nitrosants that are continuously formed within cells. Most cells generally …
oxidants and nitrosants that are continuously formed within cells. Most cells generally …
Identification of novel fluorinated surfactants in aqueous film forming foams and commercial surfactant concentrates
LA D'Agostino, SA Mabury - Environmental science & technology, 2014 - ACS Publications
Recent studies comparing the results of total organofluorine-combustion ion
chromatography (TOF-CIC) to targeted analysis of perfluoroalkyl and polyfluoroalkyl …
chromatography (TOF-CIC) to targeted analysis of perfluoroalkyl and polyfluoroalkyl …
Development of a novel cross-linking strategy for fast and accurate identification of cross-linked peptides of protein complexes
Knowledge of elaborate structures of protein complexes is fundamental for understanding
their functions and regulations. Although cross-linking coupled with mass spectrometry (MS) …
their functions and regulations. Although cross-linking coupled with mass spectrometry (MS) …
A sulfilimine bond identified in collagen IV
Collagen IV networks are ancient proteins of basement membranes that underlie epithelia in
metazoa from sponge to human. The networks provide structural integrity to tissues and …
metazoa from sponge to human. The networks provide structural integrity to tissues and …
An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: sensitivity and specificity analysis
MS/MS and associated database search algorithms are essential proteomic tools for
identifying peptides. Due to their widespread use, it is now time to perform a systematic …
identifying peptides. Due to their widespread use, it is now time to perform a systematic …
MALDI versus ESI: the impact of the ion source on peptide identification
WM Nadler, D Waidelich, A Kerner… - Journal of proteome …, 2017 - ACS Publications
For mass spectrometry-based proteomic analyses, electrospray ionization (ESI) and matrix-
assisted laser desorption/ionization (MALDI) are the commonly used ionization techniques …
assisted laser desorption/ionization (MALDI) are the commonly used ionization techniques …
[HTML][HTML] Chlorination and oxidation of the extracellular matrix protein laminin and basement membrane extracts by hypochlorous acid and myeloperoxidase
Basement membranes are specialized extracellular matrices that underlie arterial wall
endothelial cells, with laminin being a key structural and biologically-active component …
endothelial cells, with laminin being a key structural and biologically-active component …
A systematic investigation into the nature of tryptic HCD spectra
A Michalski, N Neuhauser, J Cox… - Journal of proteome …, 2012 - ACS Publications
Modern mass spectrometry-based proteomics can produce millions of peptide fragmentation
spectra, which are automatically identified in databases using sequence-specific b-or y-ions …
spectra, which are automatically identified in databases using sequence-specific b-or y-ions …
Radiolytic modification of sulfur-containing amino acid residues in model peptides: fundamental studies for protein footprinting
G Xu, MR Chance - Analytical chemistry, 2005 - ACS Publications
Protein footprinting based on hydroxyl radical-mediated modification and quantitative mass
spectroscopic analysis is a proven technique for examining protein structure, protein− ligand …
spectroscopic analysis is a proven technique for examining protein structure, protein− ligand …