Applications of NMR spectroscopy to systems biochemistry

TWM Fan, AN Lane - Progress in nuclear magnetic resonance spectroscopy, 2016 - Elsevier
The past decades of advancements in NMR have made it a very powerful tool for metabolic
research. Despite its limitations in sensitivity relative to mass spectrometric techniques, NMR …

Stable isotope-resolved metabolomics and applications for drug development

TWM Fan, PK Lorkiewicz, K Sellers… - Pharmacology & …, 2012 - Elsevier
Advances in analytical methodologies, principally nuclear magnetic resonance
spectroscopy (NMR) and mass spectrometry (MS), during the last decade have made large …

[HTML][HTML] Argininosuccinate synthase: at the center of arginine metabolism

RJ Haines, LC Pendleton… - International journal of …, 2011 - ncbi.nlm.nih.gov
The levels of L-arginine, a cationic, semi-essential amino acid, are often controlled within a
cell at the level of local availability through biosynthesis. The importance of this temporal …

Inborn errors of metabolism: the flux from Mendelian to complex diseases

B Lanpher, N Brunetti-Pierri, B Lee - Nature Reviews Genetics, 2006 - nature.com
Inborn errors of metabolism are characterized by dysregulation of the metabolic networks
that underlie development and homeostasis, and constitute an important and expanding …

Towards building the silicon cell: a modular approach

JL Snoep, F Bruggeman, BG Olivier, HV Westerhoff - Biosystems, 2006 - Elsevier
Systems Biology aims to understand quantitatively how properties of biological systems can
be understood as functions of the characteristics of, and interactions between their …

Isotopomer‐based metabolomic analysis by NMR and mass spectrometry

AN Lane, TWM Fan, RM Higashi - Methods in cell biology, 2008 - Elsevier
Nuclear magnetic resonance (NMR) and mass spectrometry (MS) together are synergistic in
their ability to profile comprehensively the metabolome of cells and tissues. In addition to …

Computational models of metabolism: stability and regulation in metabolic networks

R Steuer, BH Junker - Advances in chemical physics, 2009 - Wiley Online Library
2. Topological Network Analysis 3. Stoichiometric Analysis 4. Intermediate Approaches B.
The Rationale of Mathematical Modeling III. The Basic Concepts of Metabolic Modeling A …

13N as a tracer for studying glutamate metabolism

AJL Cooper - Neurochemistry international, 2011 - Elsevier
This mini-review summarizes studies my associates and I carried out that are relevant to the
topic of the present volume [ie glutamate dehydrogenase (GDH)] using radioactive 13N (t1/2 …

From isolation to integration, a systems biology approach for building the silicon cell

JL Snoep, HV Westerhoff - Systems Biology: Definitions and Perspectives, 2005 - Springer
In the last decade, the field now commonly referred to as systems biology has developed
rapidly. With the sequencing of whole genomes and the development of analysis methods to …

The Silicon Cell initiative: working towards a detailed kinetic description at the cellular level

JL Snoep - Current opinion in biotechnology, 2005 - Elsevier
The Silicon Cell initiative aims to understand cellular systems on the basis of the
characteristics of their components. As a tool to achieve this, detailed kinetic models at the …