Toxicogenomics and systems toxicology: aims and prospects

MD Waters, JM Fostel - Nature Reviews Genetics, 2004 - nature.com
Toxicogenomics combines transcript, protein and metabolite profiling with conventional
toxicology to investigate the interaction between genes and environmental stress in disease …

Big data in chemical toxicity research: the use of high-throughput screening assays to identify potential toxicants

H Zhu, J Zhang, MT Kim, A Boison… - Chemical research in …, 2014 - ACS Publications
High-throughput screening (HTS) assays that measure the in vitro toxicity of environmental
compounds have been widely applied as an alternative to in vivo animal tests of chemical …

The Comparative Toxicogenomics Database's 10th year anniversary: update 2015

AP Davis, CJ Grondin, K Lennon-Hopkins… - Nucleic acids …, 2015 - academic.oup.com
Ten years ago, the Comparative Toxicogenomics Database (CTD; http://ctdbase. org/) was
developed out of a need to formalize, harmonize and centralize the information on …

Autism and environmental genomics

MR Herbert, JP Russo, S Yang, J Roohi, M Blaxill… - Neurotoxicology, 2006 - Elsevier
Autism spectrum disorders (ASD) are defined by behavior and diagnosed by clinical history
and observation but have no biomarkers and are presumably, etiologically and biologically …

Daphnia as an emerging model for toxicological genomics

JR Shaw, ME Pfrender, BD Eads, R Klaper… - … in Experimental Biology, 2008 - Elsevier
Daphnia are already an established model species in toxicology. This freshwater crustacean
is used commonly for environmental monitoring of pollutants around the globe and plays an …

The Comparative Toxicogenomics Database (CTD): a resource for comparative toxicological studies

CJ Mattingly, MC Rosenstein, GT Colby… - … Zoology Part A …, 2006 - Wiley Online Library
The etiology of most chronic diseases involves interactions between environmental factors
and genes that modulate important biological processes (Olden and Wilson, 2000. Nat Rev …

[HTML][HTML] t4 report: Supporting read-across using biological data

H Zhu, M Bouhifd, N Kleinstreuer, ED Kroese, Z Liu… - Altex, 2016 - ncbi.nlm.nih.gov
Read-across, ie filling toxicological data gaps by relating to similar chemicals, for which test
data are available, is usually done based on chemical similarity. Besides structure and …

The comparative toxicogenomics database: a cross-species resource for building chemical-gene interaction networks

CJ Mattingly, MC Rosenstein, AP Davis… - Toxicological …, 2006 - academic.oup.com
Chemicals in the environment play a critical role in the etiology of many human diseases.
Despite their prevalence, the molecular mechanisms of action and the effects of chemicals …

Probiotic reduced the impact of phthalates and bisphenol A mixture on type 2 diabetes mellitus development: Merging bioinformatics with in vivo analysis

K Baralić, K Živančević, D Jorgovanović… - food and chemical …, 2021 - Elsevier
Abstract Linkage between bis (2-ethylhexyl) phthalate (DEHP), dibutyl phthalate (DBP), and
bisphenol A (BPA) co-exposure and type 2 diabetes mellitus (T2DM), as well as ability of …

A network pharmacology approach to investigate the anti-inflammatory mechanism of effective ingredients from Salvia miltiorrhiza

S Cui, S Chen, Q Wu, T Chen, S Li - International immunopharmacology, 2020 - Elsevier
Salvia miltiorrhiza, known as Danshen in Chinese, has been widely used to treat
cardiovascular diseases in China. Tanshinone I (Tan I) and cryptotanshinone (CST) are the …