A systematic review of automated methods to perform white matter tract segmentation

A Joshi, H Li, NA Parikh, L He - Frontiers in Neuroscience, 2024 - frontiersin.org
White matter tract segmentation is a pivotal research area that leverages diffusion-weighted
magnetic resonance imaging (dMRI) for the identification and mapping of individual white …

Fiberprint: A subject fingerprint based on sparse code pooling for white matter fiber analysis

K Kumar, C Desrosiers, K Siddiqi, O Colliot, M Toews - NeuroImage, 2017 - Elsevier
White matter characterization studies use the information provided by diffusion magnetic
resonance imaging (dMRI) to draw cross-population inferences. However, the structure …

Phybers: a package for brain tractography analysis

LL González Rodríguez, I Osorio, A Cofre G… - Frontiers in …, 2024 - frontiersin.org
We present a Python library (Phybers) for analyzing brain tractography data. Tractography
datasets contain streamlines (also called fibers) composed of 3D points representing the …

TRAKO: efficient transmission of tractography data for visualization

D Haehn, L Franke, F Zhang… - … Conference on Medical …, 2020 - Springer
Fiber tracking produces large tractography datasets that are tens of gigabytes in size
consisting of millions of streamlines. Such vast amounts of data require formats that allow for …

White matter fiber analysis using kernel dictionary learning and sparsity priors

K Kumar, K Siddiqi, C Desrosiers - Pattern Recognition, 2019 - Elsevier
Diffusion magnetic resonance imaging, a non-invasive tool to infer white matter fiber
connections, produces a large number of streamlines containing a wealth of information on …

[PDF][PDF] A systematic review of automated

A Joshi, H Li, NA Parikh, L He - 2024 - frontiersin.org
The development of diffusion magnetic resonance imaging (dMRI) coupled with the
subsequent introduction of techniques to model water diffusion within the brain tissue using …

White matter fiber segmentation using functional varifolds

K Kumar, P Gori, B Charlier, S Durrleman… - Graphs in Biomedical …, 2017 - Springer
The extraction of fibers from dMRI data typically produces a large number of fibers, it is
common to group fibers into bundles. To this end, many specialized distance measures …

QFib: fast and efficient brain tractogram compression

C Mercier, S Rousseau, P Gori, I Bloch, T Boubekeur - Neuroinformatics, 2020 - Springer
Diffusion MRI fiber tracking datasets can contain millions of 3D streamlines, and their
representation can weight tens of gigabytes of memory. These sets of streamlines are called …

Data-driven methods for characterizing individual differences in brain MRI

K Kumar - 2018 - espace.etsmtl.ca
Understanding the structure and function of the human brain is an outstanding problem that
is critical to the development of efficient treatments for neurological diseases like Alzheimer's …

[PDF][PDF] QFib: Fast and Efficient Brain Tractogram Compression

C Mercier, S Rousseau, P Gori, I Bloch, T Boubekeur - perso.telecom-paristech.fr
Diffusion MRI fiber tracking datasets can contain millions of 3D streamlines, and their
representation can weight tens of gigabytes of memory. These sets of streamlines are called …