Next generation sequencing technologies: the doorway to the unexplored genomics of non-model plants

CIN Unamba, A Nag, RK Sharma - Frontiers in plant science, 2015 - frontiersin.org
Non-model plants ie, the species which have one or all of the characters such as long life
cycle, difficulty to grow in the laboratory or poor fecundity, have been schemed out of …

An update on the arsenal: mining resistance genes for disease management of Brassica crops in the genomic era

H Lv, Z Fang, L Yang, Y Zhang, Y Wang - Horticulture Research, 2020 - academic.oup.com
Brassica species include many economically important crops that provide nutrition and
health-promoting substances to humans worldwide. However, as with all crops, their …

Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome

PE Bayer, AA Golicz, S Tirnaz… - Plant Biotechnology …, 2019 - Wiley Online Library
Brassica oleracea is an important agricultural species encompassing many vegetable crops
including cabbage, cauliflower, broccoli and kale; however, it can be susceptible to a variety …

GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane

TWA Balsalobre, G da Silva Pereira, GRA Margarido… - BMC genomics, 2017 - Springer
Abstract Background Sugarcane (Saccharum spp.) is predominantly an autopolyploid plant
with a variable ploidy level, frequent aneuploidy and a large genome that hampers …

Genotyping-by-sequencing map permits identification of clubroot resistance QTLs and revision of the reference genome assembly in cabbage (Brassica oleracea L.)

J Lee, NK Izzah, BS Choi, HJ Joh, SC Lee… - DNA …, 2016 - academic.oup.com
Clubroot is a devastating disease caused by Plasmodiophora brassicae and results in
severe losses of yield and quality in Brassica crops. Many clubroot resistance genes and …

Understanding Host–Pathogen Interactions in Brassica napus in the Omics Era

TX Neik, J Amas, M Barbetti, D Edwards, J Batley - Plants, 2020 - mdpi.com
Brassica napus (canola/oilseed rape/rapeseed) is an economically important crop, mostly
found in temperate and sub-tropical regions, that is cultivated widely for its edible oil. Major …

Incorporating pleiotropic quantitative trait loci in dissection of complex traits: seed yield in rapeseed as an example

Z Luo, M Wang, Y Long, Y Huang, L Shi… - Theoretical and Applied …, 2017 - Springer
Key message A comprehensive linkage atlas for seed yield in rapeseed. Abstract Most
agronomic traits of interest for crop improvement (including seed yield) are highly complex …

Genetics and fine mapping of a purple leaf gene, BoPr, in ornamental kale (Brassica oleracea L. var. acephala)

X Liu, B Gao, F Han, Z Fang, L Yang, M Zhuang, H Lv… - BMC genomics, 2017 - Springer
Background Due to its variegated and colorful leaves, ornamental kale (Brassica oleracea L.
var. acephala) has become a popular ornamental plant. In this study, we report the fine …

Transcriptomics‐assisted quantitative trait locus fine mapping for the rapid identification of a nodulin 26‐like intrinsic protein gene regulating boron efficiency in …

Y Hua, D Zhang, T Zhou, M He, G Ding… - Plant, cell & …, 2016 - Wiley Online Library
Allotetraploid rapeseed (Brassica napus L., AnAnCnCn, 2n= 4x= 38) is extraordinarily
susceptible to boron (B) deficiency, a ubiquitous problem causing severe losses in seed …

TILLING, high-resolution melting (HRM), and next-generation sequencing (NGS) techniques in plant mutation breeding

S Taheri, TL Abdullah, SM Jain, M Sahebi, P Azizi - Molecular breeding, 2017 - Springer
Induced mutations have been used effectively for plant improvement. Physical and chemical
mutagens induce a high frequency of genome variation. Recently, developed screening …