Deep learning approaches for natural product discovery from plant endophytic microbiomes

SA Aghdam, AMV Brown - Environmental microbiome, 2021 - Springer
Plant microbiomes are not only diverse, but also appear to host a vast pool of secondary
metabolites holding great promise for bioactive natural products and drug discovery. Yet …

Plant–Microbe Interactions: From Genes to Ecosystems Using Populus as a Model System

MA Cregger, DL Carper, S Christel… - Phytobiomes …, 2021 - Am Phytopath Society
Plant–microbe symbioses span a continuum from pathogenic to mutualistic, with functional
consequences for both organisms in the symbiosis. In order to increase sustainable food …

Assembly of root-associated microbial community of typical rice cultivars in different soil types

Y Xu, Y Ge, J Song, C Rensing - Biology and Fertility of Soils, 2020 - Springer
Root-associated microbial communities have been widely studied in the model plant
Arabidopsis thaliana, but have been much less explored in agronomically important crops …

Plant Growth Promotion and Biocontrol of Leaf Blight Caused by Nigrospora sphaerica on Passion Fruit by Endophytic Bacillus subtilis Strain GUCC4

J Wang, S Qin, R Fan, Q Peng, X Hu, L Yang, Z Liu… - Journal of Fungi, 2023 - mdpi.com
Passion fruit (Passiflora edulis Sims) is widely cultivated in tropic and sub-tropic regions for
the production of fruit, flowers, cosmetics, and for pharmacological applications. Its high …

Epiphytic and endophytic bacteria on olive tree phyllosphere: exploring tissue and cultivar effect

D Mina, JA Pereira, T Lino-Neto, P Baptista - Microbial ecology, 2020 - Springer
Variation on bacterial communities living in the phyllosphere as epiphytes and endophytes
has been attributed to plant host effects. However, there is contradictory or inconclusive …

New insight to the role of microbes in the methane exchange in trees: evidence from metagenomic sequencing

A Putkinen, HMP Siljanen, A Laihonen… - New …, 2021 - Wiley Online Library
Methane (CH4) exchange in tree stems and canopies and the processes involved are
among the least understood components of the global CH4 cycle. Recent studies have …

Interplay between Amaryllidaceae alkaloids, the bacteriome and phytopathogens in Lycoris radiata

J Zhou, IA Stringlis, J Wen, Y Liu, S Xu… - New …, 2024 - Wiley Online Library
Alkaloids are a large group of plant secondary metabolites with various structures and
activities. It is important to understand their functions in the interplay between plants and the …

Linking Phyllostachys edulis (moso bamboo) growth with soil nitrogen cycling and microbial community of plant-soil system: Effects of plant age and niche …

M Zhang, W Wang, SH Bai, Z Xu, Z Yun… - Industrial Crops and …, 2022 - Elsevier
Understanding the impacts of plant age on bamboo growth, soil nutrient and functional
microorganism can assist in the development of management practices to maximize the …

Pinewood Nematode Alters the Endophytic and Rhizospheric Microbial Communities of Pinus massoniana

W Zhang, X Wang, Y Li, Z Liu, D Li, X Wen, Y Feng… - Microbial ecology, 2021 - Springer
Pinewood nematode, Bursaphelenchus xylophilus, is one of the greatest threats to pine
trees and is spreading all over the world. During the nematode's pathogenesis, plant …

Bacterial endophytes of sugar maple leaves vary more idiosyncratically than epiphytes across a large geographic area

G Demarquest, G Lajoie - FEMS Microbiology Ecology, 2023 - academic.oup.com
Bacteria from the leaf surface and the leaf tissue have been attributed with several beneficial
properties for their plant host. Though physically connected, the microbial ecology of these …