Transmission of SARS-CoV-2 in free-ranging white-tailed deer in the United States
SARS-CoV-2 is a zoonotic virus with documented bi-directional transmission between
people and animals. Transmission of SARS-CoV-2 from humans to free-ranging white-tailed …
people and animals. Transmission of SARS-CoV-2 from humans to free-ranging white-tailed …
Common methods for phylogenetic Tree Construction and their implementation in R
Y Zou, Z Zhang, Y Zeng, H Hu, Y Hao, S Huang, B Li - Bioengineering, 2024 - mdpi.com
A phylogenetic tree can reflect the evolutionary relationships between species or gene
families, and they play a critical role in modern biological research. In this review, we …
families, and they play a critical role in modern biological research. In this review, we …
Phylogeography and transmission of Mycobacterium tuberculosis spanning prisons and surrounding communities in Paraguay
Recent rises in incident tuberculosis (TB) cases in Paraguay and the increasing
concentration of TB within prisons highlight the urgency of targeting strategies to interrupt …
concentration of TB within prisons highlight the urgency of targeting strategies to interrupt …
Illusion of flight? Absence, evidence and the age of winged insects
SR Schachat, PZ Goldstein, R Desalle… - Biological Journal of …, 2023 - academic.oup.com
The earliest fossils of winged insects (Pterygota) are mid-Carboniferous (latest
Mississippian, 328–324 Mya), but estimates of their age based on fossil-calibrated …
Mississippian, 328–324 Mya), but estimates of their age based on fossil-calibrated …
Properties of Markov chain Monte Carlo performance across many empirical alignments
SM Harrington, V Wishingrad… - Molecular biology and …, 2021 - academic.oup.com
Nearly all current Bayesian phylogenetic applications rely on Markov chain Monte Carlo
(MCMC) methods to approximate the posterior distribution for trees and other parameters of …
(MCMC) methods to approximate the posterior distribution for trees and other parameters of …
Towards reliable detection of introgression in the presence of among-species rate variation
The role of interspecific hybridization has recently seen increasing attention, especially in
the context of diversification dynamics. Genomic research has now made it abundantly clear …
the context of diversification dynamics. Genomic research has now made it abundantly clear …
Genome-wide ultraconserved elements resolve phylogenetic relationships and biogeographic history among Neotropical leaf-nosed bats in the genus Anoura …
CA Calderón-Acevedo, JC Bagley… - Molecular Phylogenetics …, 2022 - Elsevier
Abstract Anoura Gray, 1838 are Neotropical nectarivorous bats and the most speciose
genus within the phyllostomid subfamily Glossophaginae. However, Anoura species limits …
genus within the phyllostomid subfamily Glossophaginae. However, Anoura species limits …
[PDF][PDF] Phylotranscriptomics Reveals Discordance in the Phylogeny of Hawaiian Drosophila and Scaptomyza (Diptera: Drosophilidae)
SH Church, CG Extavour - Molecular Biology and Evolution, 2022 - academic.oup.com
Island radiations present natural laboratories for studying the evolutionary process. The
Hawaiian Drosophilidae are one such radiation, with nearly 600 described species and …
Hawaiian Drosophilidae are one such radiation, with nearly 600 described species and …
Assessment of phylogenetic approaches to study the timing of recombination cessation on sex chromosomes
The evolution of sex chromosomes is hypothesized to be punctuated by consecutive
recombination cessation events, forming “evolutionary strata” that ceased to recombine at …
recombination cessation events, forming “evolutionary strata” that ceased to recombine at …
Estimating the mean in the space of ranked phylogenetic trees
L Berling, L Collienne, A Gavryushkin - Bioinformatics, 2024 - academic.oup.com
Motivation Reconstructing evolutionary histories of biological entities, such as genes, cells,
organisms, populations, and species, from phenotypic and molecular sequencing data is …
organisms, populations, and species, from phenotypic and molecular sequencing data is …