Top-down protein analysis by tandem-trapped ion mobility spectrometry/mass spectrometry (tandem-TIMS/MS) coupled with ultraviolet photodissociation (UVPD) and …
“Top-down” proteomics analyzes intact proteins and identifies proteoforms by their intact
mass as well as the observed fragmentation pattern in tandem mass spectrometry (MS/MS) …
mass as well as the observed fragmentation pattern in tandem mass spectrometry (MS/MS) …
HyPep: An open-source software for identification and discovery of neuropeptides using sequence homology search
Neuropeptides are a class of endogenous peptides that have key regulatory roles in
biochemical, physiological, and behavioral processes. Mass spectrometry analyses of …
biochemical, physiological, and behavioral processes. Mass spectrometry analyses of …
Mapping Conformational Changes in the Saliva Proteome Potentially Associated with Oral Cancer Aggressiveness
Diverse proteomics-based strategies have been applied to saliva to quantitatively identify
diagnostic and prognostic targets for oral cancer. Considering that these targets may be …
diagnostic and prognostic targets for oral cancer. Considering that these targets may be …
Exploiting Charge State Distribution To Probe Intramolecular Interactions in Gas-Phase Phosphopeptides and Enhance Proteomics Analyses
V Gorshkov, F Kjeldsen - Analytical Chemistry, 2024 - ACS Publications
Charging of analytes is a prerequisite for performing mass spectrometry analysis. In
proteomics, electrospray ionization is the dominant technique for this process. Although the …
proteomics, electrospray ionization is the dominant technique for this process. Although the …
Potential of Negative-Ion-Mode Proteomics: An MS1-Only Approach
PA Penanes, V Gorshkov, MV Ivanov… - Journal of proteome …, 2023 - ACS Publications
Current proteomics approaches rely almost exclusively on using the positive ionization
mode, resulting in inefficient ionization of many acidic peptides. This study investigates …
mode, resulting in inefficient ionization of many acidic peptides. This study investigates …
[PDF][PDF] Identification of variant peptides using mass spectrometry
M Hruška - theses.cz
Detection of peptides from mass spectrometric data lies at the core of computational
proteomics. In our research, we focus on detecting variant peptides—a large class of …
proteomics. In our research, we focus on detecting variant peptides—a large class of …