The evolution of insect biodiversity

E Tihelka, C Cai, M Giacomelli, J Lozano-Fernandez… - Current Biology, 2021 - cell.com
Insects comprise over half of all described animal species. Together with the Protura
(coneheads), Collembola (springtails) and Diplura (two-pronged bristletails), insects form …

Representation and participation across 20 years of plant genome sequencing

RA Marks, S Hotaling, PB Frandsen, R VanBuren - Nature plants, 2021 - nature.com
The field of plant genome sequencing has grown rapidly in the past 20 years, leading to
increases in the quantity and quality of publicly available genomic resources. The growing …

Toward a genome sequence for every animal: Where are we now?

S Hotaling, JL Kelley… - Proceedings of the …, 2021 - National Acad Sciences
In less than 25 y, the field of animal genome science has transformed from a discipline
seeking its first glimpses into genome sequences across the Tree of Life to a global …

Highly contiguous assemblies of 101 drosophilid genomes

BY Kim, JR Wang, DE Miller, O Barmina, E Delaney… - Elife, 2021 - elifesciences.org
Over 100 years of studies in Drosophila melanogaster and related species in the genus
Drosophila have facilitated key discoveries in genetics, genomics, and evolution. While high …

Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges

JS Sproul, S Hotaling, J Heckenhauer… - Genome …, 2023 - genome.cshlp.org
Repetitive elements (REs) are integral to the composition, structure, and function of
eukaryotic genomes, yet remain understudied in most taxonomic groups. We investigated …

Direct sequencing of insect symbionts via nanoporse adaptive sampling

JH Badger, R Giordano, A Zimin, R Wappel… - Current Opinion in Insect …, 2023 - Elsevier
Highlights•Oxford Nanopore adaptive sampling can be used to enrich for insect symbiont
genomes•Long read sequencing improved the contiguity of symbiont genomes•New …

The complete genome assemblies of 19 insect pests of worldwide importance to agriculture

R King, B Buer, TGE Davies, E Ganko, M Guest… - Pesticide Biochemistry …, 2023 - Elsevier
There are many insect pests worldwide that damage agricultural crop and reduce yield
either by direct feeding or by the transmission of plant diseases. To date, control of pest …

Whole genome assemblies of Zophobas morio and Tenebrio molitor

S Kaur, SA Stinson, GC diCenzo - G3: Genes, Genomes …, 2023 - academic.oup.com
Zophobas morio (= Zophobas atratus) and Tenebrio molitor are darkling beetles with
industrial importance due to their use as feeder insects and their apparent ability to …

Assessing species coverage and assembly quality of rapidly accumulating sequenced genomes

R Feron, RM Waterhouse - GigaScience, 2022 - academic.oup.com
Background Ambitious initiatives to coordinate genome sequencing of Earth's biodiversity
mean that the accumulation of genomic data is growing rapidly. In addition to cataloguing …

Phylogenomics and systematics of Entomobryoidea (Collembola): marker design, phylogeny and classification

NN Godeiro, Y Ding, NG Cipola, S Jantarit… - …, 2023 - Wiley Online Library
Entomobryoidea has been the focus of phylogenetic studies in recent years owing to a
divergence between morphological and genetic data. Recent phylogenies have converged …