Genomic selection in plant breeding: methods, models, and perspectives
Genomic selection (GS) facilitates the rapid selection of superior genotypes and accelerates
the breeding cycle. In this review, we discuss the history, principles, and basis of GS and …
the breeding cycle. In this review, we discuss the history, principles, and basis of GS and …
[HTML][HTML] Beat the stress: breeding for climate resilience in maize for the tropical rainfed environments
Key message Intensive public sector breeding efforts and public-private partnerships have
led to the increase in genetic gains, and deployment of elite climate-resilient maize cultivars …
led to the increase in genetic gains, and deployment of elite climate-resilient maize cultivars …
[HTML][HTML] Genome-Assisted Prediction of Quantitative Traits Using the R Package sommer
G Covarrubias-Pazaran - PloS one, 2016 - journals.plos.org
Most traits of agronomic importance are quantitative in nature, and genetic markers have
been used for decades to dissect such traits. Recently, genomic selection has earned …
been used for decades to dissect such traits. Recently, genomic selection has earned …
Genome-wide regression and prediction with the BGLR statistical package
P Pérez, G de Los Campos - Genetics, 2014 - academic.oup.com
Many modern genomic data analyses require implementing regressions where the number
of parameters (p, eg, the number of marker effects) exceeds sample size (n). Implementing …
of parameters (p, eg, the number of marker effects) exceeds sample size (n). Implementing …
[HTML][HTML] Genomic selection: A tool for accelerating the efficiency of molecular breeding for development of climate-resilient crops
Since the inception of the theory and conceptual framework of genomic selection (GS),
extensive research has been done on evaluating its efficiency for utilization in crop …
extensive research has been done on evaluating its efficiency for utilization in crop …
Genomic selection: genome-wide prediction in plant improvement
Association analysis is used to measure relations between markers and quantitative trait loci
(QTL). Their estimation ignores genes with small effects that trigger underpinning …
(QTL). Their estimation ignores genes with small effects that trigger underpinning …
[HTML][HTML] Genomic selection in the era of next generation sequencing for complex traits in plant breeding
Genomic selection (GS) is a promising approach exploiting molecular genetic markers to
design novel breeding programs and to develop new markers-based models for genetic …
design novel breeding programs and to develop new markers-based models for genetic …
[HTML][HTML] Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number …
Genomic Selection (GS) is a new breeding method in which genome-wide markers are used
to predict the breeding value of individuals in a breeding population. GS has been shown to …
to predict the breeding value of individuals in a breeding population. GS has been shown to …
Ridge regression and other kernels for genomic selection with R package rrBLUP
JB Endelman - The plant genome, 2011 - Wiley Online Library
Many important traits in plant breeding are polygenic and therefore recalcitrant to traditional
marker‐assisted selection. Genomic selection addresses this complexity by including all …
marker‐assisted selection. Genomic selection addresses this complexity by including all …
Pitfalls of predicting complex traits from SNPs
The success of genome-wide association studies (GWASs) has led to increasing interest in
making predictions of complex trait phenotypes, including disease, from genotype data …
making predictions of complex trait phenotypes, including disease, from genotype data …