RNASeqDesign: a framework for ribonucleic acid sequencing genomewide power calculation and study design issues
Massively parallel sequencing (also known as next generation sequencing (NGS))
technology has emerged as a powerful tool in characterizing genomic profiles. Among many …
technology has emerged as a powerful tool in characterizing genomic profiles. Among many …
RnaSeqSampleSize: real data based sample size estimation for RNA sequencing
Background One of the most important and often neglected components of a successful
RNA sequencing (RNA-Seq) experiment is sample size estimation. A few negative binomial …
RNA sequencing (RNA-Seq) experiment is sample size estimation. A few negative binomial …
RNAseqPS: a web tool for estimating sample size and power for RNAseq experiment
Sample size and power determination is the first step in the experimental design of a
successful study. Sample size and power calculation is required for applications for National …
successful study. Sample size and power calculation is required for applications for National …
Calculating sample size estimates for RNA sequencing data
Background: Given the high technical reproducibility and orders of magnitude greater
resolution than microarrays, next-generation sequencing of mRNA (RNA-Seq) is quickly …
resolution than microarrays, next-generation sequencing of mRNA (RNA-Seq) is quickly …
Sample size calculation based on generalized linear models for differential expression analysis in RNA-seq data
CI Li, Y Shyr - Statistical Applications in Genetics and Molecular …, 2016 - degruyter.com
As RNA-seq rapidly develops and costs continually decrease, the quantity and frequency of
samples being sequenced will grow exponentially. With proteomic investigations becoming …
samples being sequenced will grow exponentially. With proteomic investigations becoming …
Adjusted sample size calculation for RNA-seq data in the presence of confounding covariates
X Li, SN Rai, EC Rouchka, TE O'Toole, NGF Cooper - BioMedInformatics, 2021 - mdpi.com
Sample size calculation for adequate power analysis is critical in optimizing RNA-seq
experimental design. However, the complexity increases for directly estimating sample size …
experimental design. However, the complexity increases for directly estimating sample size …
[PDF][PDF] Statistical Design and Analysis of RNA-Seq Data
PL Auer, RW Doerge - stat.purdue.edu
Next-generation sequencing technologies are quickly becoming the preferred approach for
characterizing and quantifying entire genomes. Even though data produced from these …
characterizing and quantifying entire genomes. Even though data produced from these …
Sample Size Calculation for Differential Expression Analysis of RNA-Seq Data
Abstract The Holy Grail of precision medicine is the comprehensive integration of patient
genotypic with phenotypic data to develop personalized disease prevention and treatment …
genotypic with phenotypic data to develop personalized disease prevention and treatment …
[PDF][PDF] Inference and sample size calculations based on statistical tests in a negative binomial distribution for differential gene expression in RNA-seq data
X Li, GF Cooper, Y Shyr, D Wu, EC Rouchka, RS Gill… - J Biom …, 2017 - academia.edu
The high throughput RNA sequencing (RNA-seq) technology has become the popular
method of choice for transcriptomics and the detection of differentially expressed genes …
method of choice for transcriptomics and the detection of differentially expressed genes …
Power analysis for RNA-Seq differential expression studies
Background Sample size calculation and power estimation are essential components of
experimental designs in biomedical research. It is very challenging to estimate power for …
experimental designs in biomedical research. It is very challenging to estimate power for …