[PDF][PDF] Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics

TJ White, T Bruns, S Lee, J Taylor - PCR protocols: a guide to …, 1990 - msafungi.org
A chapter on fungi that has been cited more than 10,000 times! Congratulations to Thomas
J. White, Steven B. Lee, Thomas D. Bruns, and John W. Taylor, who pioneered the use of …

A 5.8 S nuclear ribosomal RNA gene sequence database: applications to ecology and evolution

KW Cullings, DR Vogler - Molecular Ecology, 1998 - Wiley Online Library
We compiled a 5.8 S nuclear ribosomal gene sequence database for animals, plants, and
fungi using both newly generated and GenBank sequences. We demonstrate the utility of …

Sequencing and analysis of fungal rRNA operons for development of broad-range fungal PCR assays

PD Khot, DL Ko, DN Fredricks - Applied and environmental …, 2009 - Am Soc Microbiol
ABSTRACT rRNA genes are attractive targets for developing PCR assays targeting human
fungal pathogens. Most studies have focused on the 18S rRNA gene, internal transcribed …

Preparation of fungal genomic DNA for PCR and RAPD analysis

GC Graham, RJ Henry - … methods based on arbitrarily primed PCR, 1997 - Springer
The successful extraction of DNA from fungal isolates is essential to the investigation of
fungal genetics at a molecular level (Graham et al. 1994). The ever increasing array of …

The polymerase chain reaction and its application to filamentous fungi

LM Foster, KR Kozak, MG Loftus, JJ Stevens… - Mycological …, 1993 - Elsevier
The polymerase chain reaction (PCR) is a rapid and sensitive procedure for the in vitro
amplification of specific segments of DNA. The ability to perform primer-directed …

Intragenomic variation of fungal ribosomal genes is higher than previously thought

UK Simon, M Weiß - Molecular biology and evolution, 2008 - academic.oup.com
Nuclear ribosomal genes in most eukaryotes are present in multiple copies and often used
for taxonomic and phylogenetic analyses. We comprehensively examined intragenomic …

Fungal identification using molecular tools: a primer for the natural products research community

HA Raja, AN Miller, CJ Pearce… - Journal of natural …, 2017 - ACS Publications
Fungi are morphologically, ecologically, metabolically, and phylogenetically diverse. They
are known to produce numerous bioactive molecules, which makes them very useful for …

Concerted evolution in the ribosomal RNA cistron

K Naidoo, ET Steenkamp, MPA Coetzee, MJ Wingfield… - PLoS one, 2013 - journals.plos.org
Background Gene conversion is the mechanism proposed to be responsible for the
homogenization of multigene families such as the nuclear ribosomal gene clusters. This …

Evolutionary relationships within the fungi: analyses of nuclear small subunit rRNA sequences

TD Bruns, R Vilgalys, SM Barns, D Gonzalez… - Molecular phylogenetics …, 1992 - Elsevier
Nucleotide sequences of the small subunit ribosomal RNA (18S) gene were used to
investigate evolutionary relationships within the Fungi. The inferred tree topologies are in …

Sequence or structure? A short review on the application of nucleic acid sequence information to fungal taxonomy.

JI Mitchell, PJ Roberts, ST Moss - 1995 - cabidigitallibrary.org
In this review, details are given of the amplification process of the polymerase chain reaction
and the application of molecular techniques in determining gene sequences which can be …