RNA velocity of single cells
RNA abundance is a powerful indicator of the state of individual cells. Single-cell RNA
sequencing can reveal RNA abundance with high quantitative accuracy, sensitivity and …
sequencing can reveal RNA abundance with high quantitative accuracy, sensitivity and …
Direct RNA sequencing
F Ozsolak, AR Platt, DR Jones, JG Reifenberger… - Nature, 2009 - nature.com
Our understanding of human biology and disease is ultimately dependent on a complete
understanding of the genome and its functions. The recent application of microarray and …
understanding of the genome and its functions. The recent application of microarray and …
[HTML][HTML] A single-cell time-lapse of mouse prenatal development from gastrula to birth
The house mouse (Mus musculus) is an exceptional model system, combining genetic
tractability with close evolutionary affinity to humans,. Mouse gestation lasts only 3 weeks …
tractability with close evolutionary affinity to humans,. Mouse gestation lasts only 3 weeks …
[HTML][HTML] RNA profiles reveal signatures of future health and disease in pregnancy
Maternal morbidity and mortality continue to rise, and pre-eclampsia is a major driver of this
burden. Yet the ability to assess underlying pathophysiology before clinical presentation to …
burden. Yet the ability to assess underlying pathophysiology before clinical presentation to …
Generalizing RNA velocity to transient cell states through dynamical modeling
RNA velocity has opened up new ways of studying cellular differentiation in single-cell RNA-
sequencing data. It describes the rate of gene expression change for an individual gene at a …
sequencing data. It describes the rate of gene expression change for an individual gene at a …
[HTML][HTML] RNA velocity: molecular kinetics from single-cell RNA-Seq
V Svensson, L Pachter - Molecular cell, 2018 - cell.com
RNA Velocity: Molecular Kinetics from Single-Cell RNA-Seq: Molecular Cell Skip to Main
Content Skip to Main Menu Advertisement Molecular Cell This journal offers authors two …
Content Skip to Main Menu Advertisement Molecular Cell This journal offers authors two …
Single-molecule imaging of transcription dynamics in somatic stem cells
JC Wheat, Y Sella, M Willcockson, AI Skoultchi… - Nature, 2020 - nature.com
Molecular noise is a natural phenomenon that is inherent to all biological systems,. How
stochastic processes give rise to the robust outcomes that support tissue homeostasis …
stochastic processes give rise to the robust outcomes that support tissue homeostasis …
[HTML][HTML] Measuring absolute RNA copy numbers at high temporal resolution reveals transcriptome kinetics in development
NDL Owens, IL Blitz, MA Lane, I Patrushev, JD Overton… - Cell reports, 2016 - cell.com
Transcript regulation is essential for cell function, and misregulation can lead to disease.
Despite technologies to survey the transcriptome, we lack a comprehensive understanding …
Despite technologies to survey the transcriptome, we lack a comprehensive understanding …
Alignment of single-cell trajectories to compare cellular expression dynamics
A Alpert, LS Moore, T Dubovik, SS Shen-Orr - Nature methods, 2018 - nature.com
Single-cell RNA sequencing and high-dimensional cytometry can be used to generate
detailed trajectories of dynamic biological processes such as differentiation or development …
detailed trajectories of dynamic biological processes such as differentiation or development …
Single-cell Ribo-seq reveals cell cycle-dependent translational pausing
Single-cell sequencing methods have enabled in-depth analysis of the diversity of cell types
and cell states in a wide range of organisms. These tools focus predominantly on …
and cell states in a wide range of organisms. These tools focus predominantly on …