Coordinated effects of sequence variation on DNA binding, chromatin structure, and transcription
H Kilpinen, SM Waszak, AR Gschwind, SK Raghav… - Science, 2013 - science.org
DNA sequence variation has been associated with quantitative changes in molecular
phenotypes such as gene expression, but its impact on chromatin states is poorly …
phenotypes such as gene expression, but its impact on chromatin states is poorly …
Heritable individual-specific and allele-specific chromatin signatures in humans
The extent to which variation in chromatin structure and transcription factor binding may
influence gene expression, and thus underlie or contribute to variation in phenotype, is …
influence gene expression, and thus underlie or contribute to variation in phenotype, is …
Extensive variation in chromatin states across humans
M Kasowski, S Kyriazopoulou-Panagiotopoulou… - Science, 2013 - science.org
The majority of disease-associated variants lie outside protein-coding regions, suggesting a
link between variation in regulatory regions and disease predisposition. We studied …
link between variation in regulatory regions and disease predisposition. We studied …
Cis-acting regulatory variation in the human genome
T Pastinen, TJ Hudson - Science, 2004 - science.org
The systematic screening of the human genome for genetic variants that affect gene
regulation should advance our fundamental understanding of phenotypic diversity and lead …
regulation should advance our fundamental understanding of phenotypic diversity and lead …
Chromatin three-dimensional interactions mediate genetic effects on gene expression
INTRODUCTION Genome-wide studies on the genetic basis of gene expression have
advanced considerably our understanding of the function of the human genome. Large …
advanced considerably our understanding of the function of the human genome. Large …
Molecular basis and biological function of variability in spatial genome organization
EH Finn, T Misteli - Science, 2019 - science.org
BACKGROUND The eukaryotic genome is hierarchically organized in the cell nucleus into
DNA loops, chromatin domains, compartments, and, ultimately, chromosomes. Many of the …
DNA loops, chromatin domains, compartments, and, ultimately, chromosomes. Many of the …
Identification of genetic variants that affect histone modifications in human cells
Histone modifications are important markers of function and chromatin state, yet the DNA
sequence elements that direct them to specific genomic locations are poorly understood …
sequence elements that direct them to specific genomic locations are poorly understood …
Common regulatory variation impacts gene expression in a cell type–dependent manner
Studies correlating genetic variation to gene expression facilitate the interpretation of
common human phenotypes and disease. As functional variants may be operating in a …
common human phenotypes and disease. As functional variants may be operating in a …
Whole-genome patterns of common DNA variation in three human populations
Individual differences in DNA sequence are the genetic basis of human variability. We have
characterized whole-genome patterns of common human DNA variation by genotyping …
characterized whole-genome patterns of common human DNA variation by genotyping …
Genome-wide allele-specific analysis: insights into regulatory variation
T Pastinen - Nature Reviews Genetics, 2010 - nature.com
Functional genomics is rapidly progressing towards the elucidation of elements that are
crucial for the cis-regulatory control of gene expression, and population-based studies of …
crucial for the cis-regulatory control of gene expression, and population-based studies of …