[HTML][HTML] Single-cell proteo-genomic reference maps of the hematopoietic system enable the purification and massive profiling of precisely defined cell states

S Triana, D Vonficht, L Jopp-Saile, S Raffel, R Lutz… - Nature …, 2021 - nature.com
Single-cell genomics technology has transformed our understanding of complex cellular
systems. However, excessive cost and a lack of strategies for the purification of newly …

[HTML][HTML] An immunophenotype-coupled transcriptomic atlas of human hematopoietic progenitors

X Zhang, B Song, MJ Carlino, G Li, K Ferchen… - Nature …, 2024 - nature.com
Abstract Analysis of the human hematopoietic progenitor compartment is being transformed
by single-cell multimodal approaches. Cellular indexing of transcriptomes and epitopes by …

[HTML][HTML] Streamlined single-cell proteomics by an integrated microfluidic chip and data-independent acquisition mass spectrometry

ST Gebreyesus, AA Siyal, RB Kitata, ESW Chen… - Nature …, 2022 - nature.com
Single-cell proteomics can reveal cellular phenotypic heterogeneity and cell-specific
functional networks underlying biological processes. Here, we present a streamlined …

[HTML][HTML] Quantitative single-cell proteomics as a tool to characterize cellular hierarchies

EM Schoof, B Furtwängler, N Üresin, N Rapin… - Nature …, 2021 - nature.com
Large-scale single-cell analyses are of fundamental importance in order to capture
biological heterogeneity within complex cell systems, but have largely been limited to RNA …

[HTML][HTML] Studying hematopoiesis using single-cell technologies

F Ye, W Huang, G Guo - Journal of hematology & oncology, 2017 - Springer
Hematopoiesis is probably the best-understood stem cell differentiation system;
hematopoietic stem cell (HSC) transplantation represents the most widely used regenerative …

Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data

D Sun, X Guan, AE Moran, LY Wu, DZ Qian… - Nature …, 2022 - nature.com
Single-cell RNA sequencing (scRNA-seq) distinguishes cell types, states and lineages
within the context of heterogeneous tissues. However, current single-cell data cannot …

[HTML][HTML] High throughput multi-omics approaches for clinical trial evaluation and drug discovery

JM Zielinski, JJ Luke, S Guglietta, C Krieg - Frontiers in immunology, 2021 - frontiersin.org
High throughput single cell multi-omics platforms, such as mass cytometry (cytometry by time-
of-flight; CyTOF), high dimensional imaging (> 6 marker; Hyperion, MIBIscope, CODEX …

Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

EP Mimitou, CA Lareau, KY Chen… - Nature …, 2021 - nature.com
Recent technological advances have enabled massively parallel chromatin profiling with
scATAC-seq (single-cell assay for transposase accessible chromatin by sequencing). Here …

[HTML][HTML] Immunology driven by large-scale single-cell sequencing

T Gomes, SA Teichmann, C Talavera-López - Trends in immunology, 2019 - cell.com
The immune system encompasses a large degree of phenotypic diversity and plasticity in its
cell types, and more is to be uncovered. We argue that large, multiomic datasets of single …

Deep profiling of cellular heterogeneity by emerging single‐cell proteomic technologies

L Yang, J George, J Wang - Proteomics, 2020 - Wiley Online Library
The ability to comprehensively profile cellular heterogeneity in functional proteome is crucial
in advancing the understanding of cell behavior, organism development, and disease …