The methpipe software package is a comprehensive pipeline and set of tools for analyzing
whole genome bisulfite sequencing data (WGBS). This manual explains the stages in our …

Abstract 1 Summary: Whole-Genome Bisulfite Sequencing (WGBS) is a Next Generation
Sequenc- 2 ing (NGS) technique for measuring DNA methylation at base resolution. Recent …

Background DNA methylation is an important epigenetic modification that is known to
regulate gene expression. Whole-genome bisulfite sequencing (WGBS) is a powerful …

Here, we present BAT, a modular bisulfite analysis toolkit, that facilitates the analysis of
bisulfite sequencing data. It covers the essential analysis steps of read alignment, quality …

Abstract Background Whole-Genome Bisulfite Sequencing (WGBS) is a Next Generation
Sequencing (NGS) technique for measuring DNA methylation at base resolution. Continuing …

DNA methylation is a covalent modification of DNA that plays important roles in processes
such as the regulation of gene expression, transcription factor binding, and suppression of …

High-throughput sequencing is increasingly being used in combination with bisulfite (BS)
assays to study DNA methylation at nucleotide resolution. Although several programmes …

DNA methylation, one of the most important epigenetic modifications, plays a crucial role in
various biological processes. The level of DNA methylation can be measured using whole …

Background DNA methylation is a major epigenetic modification regulating several
biological processes. A standard approach to measure DNA methylation is bisulfite …

High-throughput sequencing of bisulfite-converted DNA is a technique used to measure
DNA methylation levels. Although a considerable number of computational pipelines have …