[HTML][HTML] A mammalian microRNA expression atlas based on small RNA library sequencing

P Landgraf, M Rusu, R Sheridan, A Sewer, N Iovino… - Cell, 2007 - cell.com
MicroRNAs (miRNAs) are small noncoding regulatory RNAs that reduce stability and/or
translation of fully or partially sequence-complementary target mRNAs. In order to identify …

An integrated expression atlas of miRNAs and their promoters in human and mouse

D De Rie, I Abugessaisa, T Alam, E Arner, P Arner… - Nature …, 2017 - nature.com
MicroRNAs (miRNAs) are short non-coding RNAs with key roles in cellular regulation. As
part of the fifth edition of the Functional Annotation of Mammalian Genome (FANTOM5) …

[HTML][HTML] Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for …

M Hackl, T Jakobi, J Blom, D Doppmeier… - Journal of …, 2011 - Elsevier
Chinese hamster ovary (CHO) cells are the predominant cell factory for the production of
recombinant therapeutic proteins. Nevertheless, the lack in publicly available sequence …

Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues

L Castellano, J Stebbing - Nucleic acids research, 2013 - academic.oup.com
MicroRNAs (miRNAs) are small RNA molecules that regulate gene expression. They are
characterized by specific maturation processes defined by canonical and non-canonical …

[HTML][HTML] Cell-type-based analysis of microRNA profiles in the mouse brain

M He, Y Liu, X Wang, MQ Zhang, GJ Hannon… - Neuron, 2012 - cell.com
MicroRNAs (miRNA) are implicated in brain development and function but the underlying
mechanisms have been difficult to study in part due to the cellular heterogeneity in neural …

miRGator: an integrated system for functional annotation of microRNAs

S Nam, B Kim, S Shin, S Lee - Nucleic acids research, 2007 - academic.oup.com
MicroRNAs (miRNAs) constitute an important class of regulators that are involved in various
cellular and disease processes. However, the functional significance of each miRNA is …

MicroRNA profiling of the murine hematopoietic system

S Monticelli, KM Ansel, C Xiao, ND Socci… - Genome biology, 2005 - Springer
Background MicroRNAs (miRNAs) are a class of recently discovered noncoding RNA genes
that post-transcriptionally regulate gene expression. It is becoming clear that miRNAs play …

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

M Hafner, P Landgraf, J Ludwig, A Rice, T Ojo, C Lin… - Methods, 2008 - Elsevier
Distinct classes of small RNAs, 20–32 nucleotides long, play important regulatory roles for
diverse cellular processes. It is therefore important to identify and quantify small RNAs as a …

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

RD Morin, MD O'Connor, M Griffith… - Genome …, 2008 - genome.cshlp.org
MicroRNAs (miRNAs) are emerging as important, albeit poorly characterized, regulators of
biological processes. Key to further elucidation of their roles is the generation of more …

Expression profiling of mammalian microRNAs uncovers a subset of brain-expressed microRNAs with possible roles in murine and human neuronal differentiation

LF Sempere, S Freemantle, I Pitha-Rowe, E Moss… - Genome biology, 2004 - Springer
Abstract Background The microRNAs (miRNAs) are an extensive class of small noncoding
RNAs (18 to 25 nucleotides) with probable roles in the regulation of gene expression. In …