Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
The discovery of drivers of cancer has traditionally focused on protein-coding genes,,–. Here
we present analyses of driver point mutations and structural variants in non-coding regions …
we present analyses of driver point mutations and structural variants in non-coding regions …
The landscape of cancer genes and mutational processes in breast cancer
PJ Stephens, PS Tarpey, H Davies, P Van Loo… - Nature, 2012 - nature.com
All cancers carry somatic mutations in their genomes. A subset, known as driver mutations,
confer clonal selective advantage on cancer cells and are causally implicated in …
confer clonal selective advantage on cancer cells and are causally implicated in …
Landscape and function of multiple mutations within individual oncogenes
Sporadic reports have described cancer cases in which multiple driver mutations (MMs)
occur in the same oncogene,. However, the overall landscape and relevance of MMs remain …
occur in the same oncogene,. However, the overall landscape and relevance of MMs remain …
Identification of cancer driver genes based on nucleotide context
Cancer genomes contain large numbers of somatic mutations but few of these mutations
drive tumor development. Current approaches either identify driver genes on the basis of …
drive tumor development. Current approaches either identify driver genes on the basis of …
Cancer and genomics
PA Futreal, A Kasprzyk, E Birney, JC Mullikin… - Nature, 2001 - nature.com
Identification of the genes that cause oncogenesis is a central aim of cancer research. We
searched the proteins predicted from the draft human genome sequence for paralogues of …
searched the proteins predicted from the draft human genome sequence for paralogues of …
The evolutionary history of 2,658 cancers
Cancer develops through a process of somatic evolution,. Sequencing data from a single
biopsy represent a snapshot of this process that can reveal the timing of specific genomic …
biopsy represent a snapshot of this process that can reveal the timing of specific genomic …
Signatures of mutation and selection in the cancer genome
GR Bignell, CD Greenman, H Davies, AP Butler… - Nature, 2010 - nature.com
The cancer genome is moulded by the dual processes of somatic mutation and selection.
Homozygous deletions in cancer genomes occur over recessive cancer genes, where they …
Homozygous deletions in cancer genomes occur over recessive cancer genes, where they …
Chromosomally unstable mouse tumours have genomic alterations similar to diverse human cancers
Highly rearranged and mutated cancer genomes present major challenges in the
identification of pathogenetic events driving the neoplastic transformation process. Here we …
identification of pathogenetic events driving the neoplastic transformation process. Here we …
Mutational landscape and significance across 12 major cancer types
Abstract The Cancer Genome Atlas (TCGA) has used the latest sequencing and analysis
methods to identify somatic variants across thousands of tumours. Here we present data and …
methods to identify somatic variants across thousands of tumours. Here we present data and …
Pathway and network analysis of cancer genomes
Nature methods, 2015 - nature.com
Genomic information on tumors from 50 cancer types cataloged by the International Cancer
Genome Consortium (ICGC) shows that only a few well-studied driver genes are frequently …
Genome Consortium (ICGC) shows that only a few well-studied driver genes are frequently …