Synteny and collinearity in plant genomes

H Tang, JE Bowers, X Wang, R Ming, M Alam… - Science, 2008 - science.org
Correlated gene arrangements among taxa provide a valuable framework for inference of
shared ancestry of genes and for the utilization of findings from model organisms to study …

Plant comparative genetics after 10 years

MD Gale, KM Devos - Science, 1998 - science.org
The past 10 years have seen the discovery of unexpected levels of conservation of gene
content and gene orders over millions of years of evolution within grasses, crucifers …

Plant genome evolution: lessons from comparative genomics at the DNA level

R Schmidt - Functional Genomics, 2002 - Springer
Angiosperm genomes show tremendous variability in genome size and chromosome
number. Nevertheless, comparative genetic mapping has revealed genome collinearity of …

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

JE Bowers, BA Chapman, J Rong, AH Paterson - Nature, 2003 - nature.com
Conservation of gene order in vertebrates is evident after hundreds of millions of years of
divergence,, but comparisons of the Arabidopsis thaliana sequence to partial gene orders of …

Genome and gene duplications and gene expression divergence: a view from plants

Y Wang, X Wang, AH Paterson - … of the New York Academy of …, 2012 - Wiley Online Library
With many plant genomes sequenced, it is now clear that one distinguishing feature of
angiosperm (flowering plant) genomes is their high frequency of whole‐genome duplication …

Synteny: recent advances and future prospects

R Schmidt - Current Opinion in Plant Biology, 2000 - Elsevier
Their small sizes have meant that the Arabidopsis and rice genomes are the best-studied of
all plant genomes. Although even closely related plant species can show large variations in …

Comparing sequenced segments of the tomato and Arabidopsis genomes: Large-scale duplication followed by selective gene loss creates a network of synteny

HM Ku, T Vision, J Liu… - Proceedings of the …, 2000 - National Acad Sciences
A 105-kilobase bacterial artificial chromosome (BAC) clone from the ovate-containing region
of tomato chromosome 2 was sequenced and annotated. The tomato BAC sequence was …

Plant speciation

LH Rieseberg, JH Willis - science, 2007 - science.org
Like the formation of animal species, plant speciation is characterized by the evolution of
barriers to genetic exchange between previously interbreeding populations. Prezygotic …

The Origins of Genomic Duplications in Arabidopsis

TJ Vision, DG Brown, SD Tanksley - Science, 2000 - science.org
Large segmental duplications cover much of the Arabidopsis thaliana genome. Little is
known about their origins. We show that they are primarily due to at least four different large …

Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication

BA Chapman, JE Bowers, FA Feltus… - Proceedings of the …, 2006 - National Acad Sciences
Genome duplication followed by massive gene loss has permanently shaped the genomes
of many higher eukaryotes, particularly angiosperms. It has long been believed that a …