Transcriptomic profiles of neoantigen-reactive T cells in human gastrointestinal cancers

C Zheng, JN Fass, YP Shih, AJ Gunderson, NS Silva… - Cancer Cell, 2022 - cell.com
Tumor-infiltrating neoantigen-reactive T cells can mediate regression of metastatic
gastrointestinal cancers yet remain poorly characterized. We performed immunological …

Recognition of human gastrointestinal cancer neoantigens by circulating PD-1+ lymphocytes

A Gros, E Tran, MR Parkhurst, S Ilyas… - The Journal of …, 2019 - Am Soc Clin Investig
Tumor-resident lymphocytes can mount a response against neoantigens expressed in
microsatellite-stable gastrointestinal (GI) cancers, and adoptive transfer of neoantigen …

Single cell dynamics of tumor specificity vs bystander activity in CD8+ T cells define the diverse immune landscapes in colorectal cancer

DM Borràs, S Verbandt, M Ausserhofer, G Sturm, J Lim… - Cell Discovery, 2023 - nature.com
CD8+ T cell activation via immune checkpoint blockade (ICB) is successful in microsatellite
instable (MSI) colorectal cancer (CRC) patients. By comparison, the success of …

[HTML][HTML] Transcriptional landscape of human tissue lymphocytes unveils uniqueness of tumor-infiltrating T regulatory cells

M De Simone, A Arrigoni, G Rossetti, P Gruarin… - Immunity, 2016 - cell.com
Tumor-infiltrating regulatory T lymphocytes (Treg) can suppress effector T cells specific for
tumor antigens. Deeper molecular definitions of tumor-infiltrating-lymphocytes could thus …

Tn antigen expression contributes to an immune suppressive microenvironment and drives tumor growth in colorectal cancer

LAM Cornelissen, A Blanas, A Zaal… - Frontiers in …, 2020 - frontiersin.org
Expression of the tumor-associated glycan Tn antigen (αGalNAc-Ser/Thr) has been
correlated to poor prognosis and metastasis in multiple cancer types. However, the exact …

Transcriptome-based identification of tumor-reactive and bystander CD8+ T cell receptor clonotypes in human pancreatic cancer

Z Meng, A Rodriguez Ehrenfried, CL Tan… - Science translational …, 2023 - science.org
Pancreatic ductal adenocarcinoma (PDAC) is generally refractory to immune checkpoint
blockade, although patients with genetically unstable tumors can show modest therapeutic …

[HTML][HTML] Landscape of infiltrating T cells in liver cancer revealed by single-cell sequencing

C Zheng, L Zheng, JK Yoo, H Guo, Y Zhang, X Guo… - Cell, 2017 - cell.com
Systematic interrogation of tumor-infiltrating lymphocytes is key to the development of
immunotherapies and the prediction of their clinical responses in cancers. Here, we perform …

Low neoantigen expression and poor T-cell priming underlie early immune escape in colorectal cancer

PMK Westcott, NJ Sacks, JM Schenkel, ZA Ely, O Smith… - Nature cancer, 2021 - nature.com
Immune evasion is a hallmark of cancer and therapies that restore immune surveillance
have proven highly effective in cancers with high tumor mutation burden (TMB)(for example …

Revealing the transcriptional heterogeneity of organ‐specific metastasis in human gastric cancer using single‐cell RNA sequencing

H Jiang, D Yu, P Yang, R Guo, M Kong… - Clinical and …, 2022 - Wiley Online Library
Background Deciphering intra‐and inter‐tumoural heterogeneity is essential for
understanding the biology of gastric cancer (GC) and its metastasis and identifying effective …

Clonally expanded EOMES+ Tr1-like cells in primary and metastatic tumors are associated with disease progression

RJP Bonnal, G Rossetti, E Lugli, M De Simone… - Nature …, 2021 - nature.com
Regulatory T (Treg) cells are a barrier for tumor immunity and a target for immunotherapy.
Using single-cell transcriptomics, we found that CD4+ T cells infiltrating primary and …