Integrated proteogenomic characterization of clear cell renal cell carcinoma

DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song… - Cell, 2019 - cell.com
To elucidate the deregulated functional modules that drive clear cell renal cell carcinoma
(ccRCC), we performed comprehensive genomic, epigenomic, transcriptomic, proteomic …

Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness

Y Li, TSM Lih, SM Dhanasekaran, R Mannan, L Chen… - Cancer Cell, 2023 - cell.com
Clear cell renal cell carcinomas (ccRCCs) represent∼ 75% of RCC cases and account for
most RCC-associated deaths. Inter-and intratumoral heterogeneity (ITH) results in varying …

Single-cell multiomics analysis reveals regulatory programs in clear cell renal cell carcinoma

Z Long, C Sun, M Tang, Y Wang, J Ma, J Yu, J Wei… - Cell Discovery, 2022 - nature.com
The clear cell renal cell carcinoma (ccRCC) microenvironment consists of many different cell
types and structural components that play critical roles in cancer progression and drug …

Integrative single-cell analysis reveals transcriptional and epigenetic regulatory features of clear cell renal cell carcinoma

Z Yu, Y Lv, C Su, W Lu, RR Zhang, J Li, B Guo, H Yan… - Cancer Research, 2023 - AACR
Clear cell renal cell carcinoma (ccRCC) frequently features a high level of tumor
heterogeneity. Elucidating the chromatin landscape of ccRCC at the single-cell level could …

Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response

Y Zhang, SP Narayanan, R Mannan… - Proceedings of the …, 2021 - National Acad Sciences
Diverse subtypes of renal cell carcinomas (RCCs) display a wide spectrum of
histomorphologies, proteogenomic alterations, immune cell infiltration patterns, and clinical …

A proteogenomic analysis of clear cell renal cell carcinoma in a Chinese population

Y Qu, J Feng, X Wu, L Bai, W Xu, L Zhu, Y Liu… - Nature …, 2022 - nature.com
Clear cell renal cell carcinoma (ccRCC) is a common and aggressive subtype of renal
cancer. Here we conduct a comprehensive proteogenomic analysis of 232 tumor and …

Ontological analyses reveal clinically-significant clear cell renal cell carcinoma subtypes with convergent evolutionary trajectories into an aggressive type

Q Cai, A Christie, S Rajaram, Q Zhou, E Araj… - …, 2020 - thelancet.com
Background Clear cell renal cell carcinoma (ccRCC) is a particularly challenging tumor type
because of its extensive phenotypic variability as well as intra-tumoral heterogeneity (ITH) …

Multi-omic profiling of clear cell renal cell carcinoma identifies metabolic reprogramming associated with disease progression

J Hu, SG Wang, Y Hou, Z Chen, L Liu, R Li, N Li… - Nature Genetics, 2024 - nature.com
Clear cell renal cell carcinoma (ccRCC) is a complex disease with remarkable immune and
metabolic heterogeneity. Here we perform genomic, transcriptomic, proteomic, metabolomic …

A transcriptional metastatic signature predicts survival in clear cell renal cell carcinoma

AM Alchahin, S Mei, I Tsea, T Hirz, Y Kfoury… - Nature …, 2022 - nature.com
Clear cell renal cell carcinoma (ccRCC) is the most common type of kidney cancer in adults.
When ccRCC is localized to the kidney, surgical resection or ablation of the tumor is often …

Pathway signature and cellular differentiation in clear cell renal cell carcinoma

HW Tun, LA Marlow, CA von Roemeling, SJ Cooper… - PloS one, 2010 - journals.plos.org
Background Clear cell renal cell carcinoma (ccRCC) is the most common kidney cancer.
The purpose of this study is to define a biological pathway signature and a cellular …