Laser capture microdissection–reduced representation bisulfite sequencing (LCM-RRBS) maps changes in DNA methylation associated with gonadectomy-induced …

M Schillebeeckx, A Schrade, AK Löbs… - Nucleic acids …, 2013 - academic.oup.com
DNA methylation is a mechanism for long-term transcriptional regulation and is required for
normal cellular differentiation. Failure to properly establish or maintain DNA methylation …

Enhanced reduced representation bisulfite sequencing for assessment of DNA methylation at base pair resolution

FE Garrett-Bakelman, CK Sheridan… - JoVE (Journal of …, 2015 - jove.com
DNA methylation pattern mapping is heavily studied in normal and diseased tissues. A
variety of methods have been established to interrogate the cytosine methylation patterns in …

[HTML][HTML] Protocol for generating high-quality genome-scale DNA methylation sequencing data from human cancer biospecimens

EJ Rodger, PA Stockwell, S Almomani, MR Eccles… - STAR protocols, 2023 - Elsevier
Aberrant DNA methylation is a universal feature of cancer. Here, we present a protocol for
generating high-quality genome-scale DNA methylation sequencing data from a variety of …

[HTML][HTML] A novel methyl-binding domain protein enrichment method for identifying genome-wide tissue-specific DNA methylation from nanogram DNA samples

VF Oliver, J Wan, S Agarwal, DJ Zack, J Qian… - Epigenetics & …, 2013 - Springer
Background Growing evidence suggests that DNA methylation plays a role in tissue-specific
differentiation. Current approaches to methylome analysis using enrichment with the methyl …

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

E Hodges, AD Smith, J Kendall, Z Xuan, K Ravi… - Genome …, 2009 - genome.cshlp.org
DNA methylation stabilizes developmentally programmed gene expression states. Aberrant
methylation is associated with disease progression and is a common feature of cancer …

[HTML][HTML] Chromosome-wide mapping of DNA methylation patterns in normal and malignant prostate cells reveals pervasive methylation of gene-associated and …

S Yegnasubramanian, Z Wu, MC Haffner, D Esopi… - BMC genomics, 2011 - Springer
Background DNA methylation has been linked to genome regulation and dysregulation in
health and disease respectively, and methods for characterizing genomic DNA methylation …

Q-RRBS: a quantitative reduced representation bisulfite sequencing method for single-cell methylome analyses

K Wang, X Li, S Dong, J Liang, F Mao, C Zeng, H Wu… - Epigenetics, 2015 - Taylor & Francis
Reduced representation bisulfite sequencing (RRBS) is a powerful method of DNA
methylome profiling that can be applied to single cells. However, no previous report has …

[HTML][HTML] Profiling genome-wide DNA methylation

WS Yong, FM Hsu, PY Chen - Epigenetics & chromatin, 2016 - Springer
DNA methylation is an epigenetic modification that plays an important role in regulating
gene expression and therefore a broad range of biological processes and diseases. DNA …

MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome

D Serre, BH Lee, AH Ting - Nucleic acids research, 2010 - academic.oup.com
DNA methylation is an epigenetic modification involved in both normal developmental
processes and disease states through the modulation of gene expression and the …

DNA methylation profile of tissue-dependent and differentially methylated regions (T-DMRs) in mouse promoter regions demonstrating tissue-specific gene expression

S Yagi, K Hirabayashi, S Sato, W Li… - Genome …, 2008 - genome.cshlp.org
DNA methylation constitutes an important epigenetic regulation mechanism in many
eukaryotes, although the extent of DNA methylation in the regulation of gene expression in …