Population analysis of retrotransposons in giraffe genomes supports RTE decline and widespread LINE1 activity in Giraffidae
Background The majority of structural variation in genomes is caused by insertions of
transposable elements (TEs). In mammalian genomes, the main TE fraction is made up of …
transposable elements (TEs). In mammalian genomes, the main TE fraction is made up of …
Genomic landscape of long terminal repeat retrotransposons (LTR-RTs) and solo LTRs as shaped by ectopic recombination in chicken and zebra finch
Y Ji, JA DeWoody - Journal of molecular evolution, 2016 - Springer
Transposable elements (TEs) are nearly ubiquitous among eukaryotic genomes, but TE
contents vary dramatically among phylogenetic lineages. Several mechanisms have been …
contents vary dramatically among phylogenetic lineages. Several mechanisms have been …
The genome of blue-capped cordon-bleu uncovers hidden diversity of LTR retrotransposons in zebra finch
J Boman, C Frankl-Vilches, M da Silva dos Santos… - Genes, 2019 - mdpi.com
Avian genomes have perplexed researchers by being conservative in both size and
rearrangements, while simultaneously holding the blueprints for a massive species radiation …
rearrangements, while simultaneously holding the blueprints for a massive species radiation …
The blackcap (Sylvia atricapilla) genome reveals a recent accumulation of LTR retrotransposons
A Bours, P Pruisscher, K Bascón-Cardozo… - Scientific Reports, 2023 - nature.com
Transposable elements (TEs) are mobile genetic elements that can move around the
genome, and as such are a source of genomic variability. Based on their characteristics we …
genome, and as such are a source of genomic variability. Based on their characteristics we …
Genome stability is in the eye of the beholder: recent retrotransposon activity varies significantly across avian diversity
Since the sequencing of the zebra finch genome it has become clear the avian genome,
while largely stable in terms of chromosome number and gene synteny, is more dynamic at …
while largely stable in terms of chromosome number and gene synteny, is more dynamic at …
Mammalian transposable elements and their impacts on genome evolution
Transposable elements (TEs) are genetic elements with the ability to mobilize and replicate
themselves in a genome. Mammalian genomes are dominated by TEs, which can reach …
themselves in a genome. Mammalian genomes are dominated by TEs, which can reach …
Transposable element evolution in mammals
C Anania - nature genetics, 2023 - nature.com
Transposable elements (TEs) are thought to have contributed to the evolution of their host
organisms. However, owing to the lack of suitable genomic resources and tools, TEs have …
organisms. However, owing to the lack of suitable genomic resources and tools, TEs have …
Activity of ancient RTE retroposons during the evolution of cows, spiral-horned antelopes, and Nilgais (Bovinae)
MA Nilsson, D Klassert, MF Bertelsen… - Molecular biology …, 2012 - academic.oup.com
In the genome of Artiodactyla (cow, sheep, pigs, camels, and whales), a major retroposon
group originated from a presumable horizontal transfer of BovB, a retrotransposon-like …
group originated from a presumable horizontal transfer of BovB, a retrotransposon-like …
Bov-B-mobilized SINEs in vertebrate genomes
KP Gogolevsky, NS Vassetzky, DA Kramerov - Gene, 2008 - Elsevier
Two new short retroposon families (SINEs) have been found in the genome of springhare
Pedetes capensis (Rodentia). One of them, Ped-1, originated from 5S rRNA, while the other …
Pedetes capensis (Rodentia). One of them, Ped-1, originated from 5S rRNA, while the other …
The devil is in the details: transposable element analysis of the Tasmanian devil genome
MA Nilsson - Mobile Genetic Elements, 2016 - Taylor & Francis
The third marsupial genome was sequenced from the Tasmanian devil (Sarcophilus
harrisii), a species that currently is driven to extinction by a rare transmissible cancer. The …
harrisii), a species that currently is driven to extinction by a rare transmissible cancer. The …