Fast sampling of the cellular metabolome

WM Van Gulik, AB Canelas, H Taymaz-Nikerel… - … Biology: Methods and …, 2012 - Springer
Obtaining meaningful snapshots of the metabolome of microorganisms requires rapid
sampling and immediate quenching of all metabolic activity, to prevent any changes in …

[HTML][HTML] Analysis of intracellular metabolites from microorganisms: quenching and extraction protocols

FR Pinu, SG Villas-Boas, R Aggio - Metabolites, 2017 - mdpi.com
Sample preparation is one of the most important steps in metabolome analysis. The
challenges of determining microbial metabolome have been well discussed within the …

Fast sampling for quantitative microbial metabolomics

WM Van Gulik - Current opinion in biotechnology, 2010 - Elsevier
Targeted metabolomics, aimed at the study of metabolic reaction networks and their
regulation in vivo, is a rapidly emerging field in systems biology. Obtaining proper …

Sample preparation procedures utilized in microbial metabolomics: An overview

M Patejko, J Jacyna, MJ Markuszewski - Journal of Chromatography B, 2017 - Elsevier
Bacteria are remarkably diverse in terms of their size, structure and biochemical properties.
Due to this fact, it is hard to develop a universal method for handling bacteria cultures during …

Bacterial metabolomics: sample preparation methods

K Mohd Kamal, MH Mahamad Maifiah… - Biochemistry …, 2022 - Wiley Online Library
Metabolomics is a comprehensive analysis of metabolites existing in biological systems. As
one of the important “omics” tools, the approach has been widely employed in various fields …

Targeted and quantitative metabolomics in bacteria

H Link, JM Buescher, U Sauer - Methods in microbiology, 2012 - Elsevier
Targeted metabolomics aims at reliable and sensitive quantification of a subset of
metabolites in a cell. Here, we describe our current methods to obtain quantitative …

Microbial metabolomics: past, present and future methodologies

MR Mashego, K Rumbold, M De Mey, E Vandamme… - Biotechnology …, 2007 - Springer
Microbial metabolomics has received much attention in recent years mainly because it
supports and complements a wide range of microbial research areas from new drug …

Sampling for metabolome analysis of microorganisms

CJ Bolten, P Kiefer, F Letisse, JC Portais… - Analytical …, 2007 - ACS Publications
In the present work we investigated the most commonly applied methods used for sampling
of microorganisms in the field of metabolomics in order to unravel potential sources of error …

The sampling and sample preparation problem in microbial metabolomics

WM Van Gulik, AB Canelas, RM Seifar… - … in practice: successful …, 2013 - Wiley Online Library
The reproducibility and accuracy of analysis methods has expanded rapidly over the past
years. Hyphenated methods, for example, GC-MS and LC-MS/MS (liquid chromatography …

Metabolomics in systems microbiology

ML Reaves, JD Rabinowitz - Current opinion in biotechnology, 2011 - Elsevier
Because of the importance of microbes as model organisms, biotechnology tools, and
contributors to mammalian and ecosystem metabolism, there has been longstanding interest …