Genome-wide transcriptional analysis of the human cell cycle identifies genes differentially regulated in normal and cancer cells

Z Bar-Joseph, Z Siegfried, M Brandeis… - Proceedings of the …, 2008 - National Acad Sciences
Characterization of the transcriptional regulatory network of the normal cell cycle is essential
for understanding the perturbations that lead to cancer. However, the complete set of cycling …

Identification of genes periodically expressed in the human cell cycle and their expression in tumors

ML Whitfield, G Sherlock, AJ Saldanha… - Molecular biology of …, 2002 - Am Soc Cell Biol
The genome-wide program of gene expression during the cell division cycle in a human
cancer cell line (HeLa) was characterized using cDNA microarrays. Transcripts of> 850 …

Meta-analysis reveals conserved cell cycle transcriptional network across multiple human cell types

B Giotti, A Joshi, TC Freeman - Bmc Genomics, 2017 - Springer
Background Cell division is central to the physiology and pathology of all eukaryotic
organisms. The molecular machinery underpinning the cell cycle has been studied …

Transcriptional regulation and function during the human cell cycle

RJ Cho, M Huang, MJ Campbell, H Dong, L Steinmetz… - Nature …, 2001 - nature.com
We report here the transcriptional profiling of the cell cycle on a genome-wide scale in
human fibroblasts. We identified approximately 700 genes that display transcriptional …

Discovering functional transcription-factor combinations in the human cell cycle

Z Zhu, J Shendure, GM Church - Genome research, 2005 - genome.cshlp.org
With the completion of full genome sequences and advancement in high-throughput
technologies, in silico methods have been successfully used to integrate diverse data …

Genome-wide functional analysis of human cell-cycle regulators

M Mukherji, R Bell, L Supekova… - Proceedings of the …, 2006 - National Acad Sciences
Human cells have evolved complex signaling networks to coordinate the cell cycle. A
detailed understanding of the global regulation of this fundamental process requires …

A high-resolution transcriptome map of cell cycle reveals novel connections between periodic genes and cancer

D Dominguez, YH Tsai, N Gomez, DK Jha, I Davis… - Cell research, 2016 - nature.com
Progression through the cell cycle is largely dependent on waves of periodic gene
expression, and the regulatory networks for these transcriptome dynamics have emerged as …

Transcriptional landscape of the human cell cycle

Y Liu, S Chen, S Wang, F Soares… - Proceedings of the …, 2017 - National Acad Sciences
Steady-state gene expression across the cell cycle has been studied extensively. However,
transcriptional gene regulation and the dynamics of histone modification at different cell …

Gene profiling of cell cycle progression through S-phase reveals sequential expression of genes required for DNA replication and nucleosome assembly

CMJ Van der Meijden, DS Lapointe, MX Luong… - Cancer research, 2002 - AACR
The ordered expression of genes after growth factor stimulation in G1 supportsthe onset of
DNA replication. To characterize regulatory events during S-phase when cell cycle …

Pan-cancer analysis distinguishes transcriptional changes of aneuploidy from proliferation

C Buccitelli, L Salgueiro, K Rowald, R Sotillo… - Genome …, 2017 - genome.cshlp.org
Patterns of gene expression in tumors can arise as a consequence of or result in genomic
instability, characterized by the accumulation of somatic copy number alterations (SCNAs) …