Environmentally enriched housing conditions affect pig welfare, immune system and gut microbiota in early life

C Wen, I Van Dixhoorn, D Schokker, H Woelders… - Animal microbiome, 2021 - Springer
Background Conventional pig housing and management conditions are associated with
gastrointestinal pathophysiology and disease susceptibility in early life. Developing new …

Genetic parameters and associated genomic regions for global immunocompetence and other health-related traits in pigs

M Ballester, Y Ramayo-Caldas… - Scientific Reports, 2020 - nature.com
The inclusion of health-related traits, or functionally associated genetic markers, in pig
breeding programs could contribute to produce more robust and disease resistant animals …

A machine learning approach for the identification of population-informative markers from high-throughput genotyping data: application to several pig breeds

G Schiavo, F Bertolini, G Galimberti, S Bovo, S Dall'Olio… - Animal, 2020 - cambridge.org
Single nucleotide polymorphisms (SNPs) able to describe population differences can be
used for important applications in livestock, including breed assignment of individual …

Genome-wide association studies for production, respiratory disease, and immune-related traits in Landrace pigs

Y Uemoto, K Ichinoseki, T Matsumoto, N Oka… - Scientific Reports, 2021 - nature.com
Identification of a quantitative trait locus (QTL) related to a chronic respiratory disease such
as Mycoplasmal pneumonia of swine (MPS) and immune-related traits is important for the …

Estimates of genomic heritability and genome-wide association studies for blood parameters in Akkaraman sheep

Y Arzik, M Kizilaslan, SN White, LMW Piel… - Scientific Reports, 2022 - nature.com
The aim of this study was to estimate genomic heritability and the impact that genetic
backgrounds have on blood parameters in Akkaraman sheep by conducting genome-wide …

Identification of transcriptional regulatory variants in pig duodenum, liver, and muscle tissues

D Crespo-Piazuelo, H Acloque… - …, 2023 - academic.oup.com
Background In humans and livestock species, genome-wide association studies (GWAS)
have been applied to study the association between variants distributed across the genome …

[HTML][HTML] Conservation genomic analysis of the Croatian indigenous Black Slavonian and Turopolje pig breeds

B Lukić, M Ferenčaković, D Šalamon, M Čačić… - Frontiers in …, 2020 - frontiersin.org
The majority of the nearly 400 existing local pig breeds are adapted to specific environments
and human needs. The demand for large production quantities and the industrialized pig …

Comparison of two multi-trait association testing methods and sequence-based fine mapping of six additive QTL in Swiss Large White pigs

A Nosková, A Mehrotra, NK Kadri, A Lloret-Villas… - BMC genomics, 2023 - Springer
Background Genetic correlations between complex traits suggest that pleiotropic variants
contribute to trait variation. Genome-wide association studies (GWAS) aim to uncover the …

Copy number variants selected during pig domestication inferred from whole genome resequencing

W Zhang, C Xu, M Zhou, L Liu, Z Ni, S Su… - Frontiers in Veterinary …, 2024 - frontiersin.org
Over extended periods of natural and artificial selection, China has developed numerous
exceptional pig breeds. Deciphering the germplasm characteristics of these breeds is crucial …

[HTML][HTML] Genome-wide epistatic interaction networks affecting feed efficiency in duroc and landrace pigs

P Banerjee, VAO Carmelo, HN Kadarmideen - Frontiers in genetics, 2020 - frontiersin.org
Interactions among genomic loci have often been overlooked in genome-wide association
studies, revealing the combinatorial effects of variants on phenotype or disease …